ggKbase home page

14_1009_02_40cm_scaffold_5406

Search features with annotation key words

Displaying 22 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_02_40cm_scaffold_5406_1
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(3..104)
DNA (102bp) protein (34aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
14_1009_02_40cm_scaffold_5406_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

257..1651
DNA (1395bp) protein (465aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_02_40cm_scaffold_5406_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

1739..2005
DNA (267bp) protein (89aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
14_1009_02_40cm_scaffold_5406_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

2008..2547
DNA (540bp) protein (180aa)
Putative Ras family protein n=1 Tax=uncultured marine microorganism HF4000_APKG10F13 RepID=B3TBS9_9ZZZZ
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_02_40cm_scaffold_5406_5
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(2549..3712)
DNA (1164bp) protein (388aa)
Serine hydroxymethyltransferase n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HJE0_ACIS0
glycine/serine hydroxymethyltransferase
Tax=RBG_16_Euryarchaeota_68_13_curated
14_1009_02_40cm_scaffold_5406_6
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(3875..5071)
DNA (1197bp) protein (399aa)
Methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IAW7_ACIB4
Tax=RBG_16_Euryarchaeota_67_27_curated
14_1009_02_40cm_scaffold_5406_7
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

5261..5821
DNA (561bp) protein (187aa)
Transcriptional regulatory protein n=1 Tax=Thermoplasmatales archaeon Gpl RepID=T0N014_9EURY
transcription regulator
Tax=RBG_16_Euryarchaeota_68_13_curated
14_1009_02_40cm_scaffold_5406_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

5922..6158
DNA (237bp) protein (79aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_02_40cm_scaffold_5406_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(6231..7139)
DNA (909bp) protein (303aa)
ribonuclease Z (EC:3.1.26.11)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000372EA3B
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_02_40cm_scaffold_5406_10
unknown

Not on your lists

comp(7244..8026)
DNA (783bp) protein (261aa)

This feature has no annotations

14_1009_02_40cm_scaffold_5406_11
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

8208..9194
DNA (987bp) protein (329aa)
Histidine ammonia-lyase n=1 Tax=Acetonema longum DSM 6540 RepID=F7NHE6_9FIRM
histidine ammonia-lyase
Tax=RBG_16_Euryarchaeota_67_27_curated
14_1009_02_40cm_scaffold_5406_12
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(9195..12290)
DNA (3096bp) protein (1032aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
14_1009_02_40cm_scaffold_5406_13
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(12257..13594)
DNA (1338bp) protein (446aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
14_1009_02_40cm_scaffold_5406_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(13770..14393)
DNA (624bp) protein (208aa)
Condensin subunit ScpB n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E819_METMS
condensin subunit ScpB
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_02_40cm_scaffold_5406_15
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(14390..15310)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037998E1
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_13_curated
14_1009_02_40cm_scaffold_5406_16
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(15307..18816)
DNA (3510bp) protein (1170aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035F4B81
chromosome segregation protein SMC
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_02_40cm_scaffold_5406_17
unknown

Not on your lists

comp(19037..20746)
DNA (1710bp) protein (570aa)

This feature has no annotations

14_1009_02_40cm_scaffold_5406_18
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(20786..21973)
DNA (1188bp) protein (396aa)
DegT/DnrJ/EryC1/StrS aminotransferase id=5241159 bin=GW2011_AR10_complete species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
putative aminotransferase
Tax=AR10
14_1009_02_40cm_scaffold_5406_19
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21963..22859)
DNA (897bp) protein (299aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NMA8_9EURY
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EMA58926.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 21995.;"
NAD-dependent epimerase/dehydratase
14_1009_02_40cm_scaffold_5406_20
R_WOR_2_48_11, WOR-2, Bacteria

Not on your lists

comp(22856..23509)
DNA (654bp) protein (218aa)
Pilin glycosylation protein n=1 Tax=Neisseria meningitidis alpha522 RepID=I4E7V4_NEIME
pglB; pilin glycosylation protein PglB
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
14_1009_02_40cm_scaffold_5406_21
R_WOR_2_48_11, WOR-2, Bacteria

Not on your lists

comp(23518..24663)
DNA (1146bp) protein (382aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14) rbh
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12VN5_METBU rbh
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
14_1009_02_40cm_scaffold_5406_22
RBG_19FT_COMBO_Chloroflexi_47_15_curated, Chloroflexi, Bacteria

Not on your lists

comp(24660..25709)
DNA (1050bp) protein (350aa)
N-acetylneuraminate synthase (EC:2.5.1.57)
N-acetylneuraminate synthase id=3545364 bin=GWF2_Lentisphaerae_57_35 species=Rhodopirellula sp. SWK7 genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Tax=RBG_19FT_COMBO_Chloroflexi_47_15_curated
Displaying 22 items

View Taxonomy