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14_1009_05_20cm_scaffold_513

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_05_20cm_scaffold_513_1
unknown

Not on your lists

comp(51..197)
DNA (147bp) protein (49aa)

This feature has no annotations

14_1009_05_20cm_scaffold_513_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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586..1212
DNA (627bp) protein (209aa)
MotA/TolQ/ExbB proton channel n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKR3_9BACT
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:EEF59556.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
tolQ; biopolymer transport protein, MotA/TolQ/ExbB family
14_1009_05_20cm_scaffold_513_3
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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1223..1660
DNA (438bp) protein (146aa)
Biopolymer transport protein n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3E0E8_METI4
exbD; biopolymer transport protein
Biopolymer transport protein {ECO:0000313|EMBL:ACD84377.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
14_1009_05_20cm_scaffold_513_4

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1664..2290
DNA (627bp) protein (209aa)
TonB family protein n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z3X7_DESAT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49402.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
TonB family protein
14_1009_05_20cm_scaffold_513_5
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

2312..2785
DNA (474bp) protein (158aa)
Biopolymer transport protein n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3E0E8_METI4
exbD; biopolymer transport protein
Biopolymer transport protein {ECO:0000313|EMBL:ACD84377.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
14_1009_05_20cm_scaffold_513_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(2782..3384)
DNA (603bp) protein (201aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobact
Non-canonical purine NTP pyrophosphatase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8T3_9BACT
Ham1 family protein
14_1009_05_20cm_scaffold_513_7
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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3570..6119
DNA (2550bp) protein (850aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
leucyl-tRNA synthetase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745B77
leucyl-tRNA synthetase
14_1009_05_20cm_scaffold_513_8
RIFOXYA2_FULL_Ignavibacteria_37_17_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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6134..6592
DNA (459bp) protein (153aa)
Large-conductance mechanosensitive channel n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=MSCL_SYNAS
mscL; large-conductance mechanosensitive channel
Tax=RIFOXYA2_FULL_Ignavibacteria_37_17_curated
14_1009_05_20cm_scaffold_513_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

6725..7243
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAL6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY16534.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
3D domain-containing protein
14_1009_05_20cm_scaffold_513_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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7277..8248
DNA (972bp) protein (324aa)
UDP-glucose 4-epimerase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZF4_9BACT
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EDY20118.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
galE; UDP-glucose 4-epimerase
14_1009_05_20cm_scaffold_513_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(8337..9320)
DNA (984bp) protein (328aa)
Glycosyl transferase family 9 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYF5_9BACT
Glycosyl transferase family 9 {ECO:0000313|EMBL:EDY20496.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
rfaF; ADP-heptose:LPS heptosyltransferase
14_1009_05_20cm_scaffold_513_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(9418..9981)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017457FE
Uncharacterized protein {ECO:0000313|EMBL:EDY18905.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
14_1009_05_20cm_scaffold_513_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(10037..11482)
DNA (1446bp) protein (482aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
MiaB family RNA modification protein (EC:1.3.1.74)
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3P9_9BACT
14_1009_05_20cm_scaffold_513_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

11582..12460
DNA (879bp) protein (293aa)
S-methyl-5'-thioadenosine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; EC=2.4.2.28 {ECO:0000256|HAMAP-Rule:MF_01963};; 5'-methylthioadenosine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
mtaP; 5'-methylthioadenosine phosphorylase (EC:2.4.2.28)
S-methyl-5'-thioadenosine phosphorylase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZS2_9BACT
14_1009_05_20cm_scaffold_513_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(12541..13725)
DNA (1185bp) protein (395aa)
8-amino-7-oxononanoate synthase {ECO:0000256|SAAS:SAAS00087543}; EC=2.3.1.47 {ECO:0000256|SAAS:SAAS00087543};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
8-amino-7-oxononanoate synthase (EC:2.3.1.47)
8-amino-7-oxononanoate synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D346_9BACT
14_1009_05_20cm_scaffold_513_16
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

13778..14311
DNA (534bp) protein (178aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IQZ7_9BACT
Glyoxalase {ECO:0000313|EMBL:AHF90444.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
Glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein
14_1009_05_20cm_scaffold_513_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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14337..14873
DNA (537bp) protein (179aa)
Putative membrane protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZGC3_TERRK
Uncharacterized protein {ECO:0000313|EMBL:AHG93868.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
14_1009_05_20cm_scaffold_513_18
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14961..16172)
DNA (1212bp) protein (404aa)
group 1 glycosyl transferase; K13057 trehalose synthase [EC:2.4.1.245] id=24577423 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ADE14825.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
14_1009_05_20cm_scaffold_513_19
unknown

Not on your lists

16261..16521
DNA (261bp) protein (87aa)

This feature has no annotations

14_1009_05_20cm_scaffold_513_20
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

16648..19077
DNA (2430bp) protein (810aa)
Protein kinase family protein,GAF domain-containing protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DK82_SINAD
protein kinase family protein,GAF domain-containing protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
14_1009_05_20cm_scaffold_513_21

Not on your lists

19521..20213
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F597DA
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49067.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
14_1009_05_20cm_scaffold_513_22
unknown

Not on your lists

20565..21050
DNA (486bp) protein (162aa)

This feature has no annotations

14_1009_05_20cm_scaffold_513_23
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(21175..21798)
DNA (624bp) protein (208aa)
nicotinamidase (EC:3.5.1.19)
Nicotinamidase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZMI5_OPITP
Tax=CG_Arma_01
14_1009_05_20cm_scaffold_513_24
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(21950..23356)
DNA (1407bp) protein (469aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
putative nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDY3_9BACT
14_1009_05_20cm_scaffold_513_25
RBG_19FT_COMBO_Chloroflexi_47_9_curated, Chloroflexi, Bacteria

Not on your lists

23639..24484
DNA (846bp) protein (282aa)
phosphosulfolactate synthase (EC:4.4.1.19)
phosphosulfolactate synthase id=14632245 bin=bin9_gal15 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
Tax=RBG_19FT_COMBO_Chloroflexi_47_9_curated
14_1009_05_20cm_scaffold_513_26
Leptolyngbya sp. PCC 7375, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(24608..25261)
DNA (654bp) protein (218aa)
Dienelactone hydrolase-like enzyme n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9EGX1_9CYAN
Dienelactone hydrolase-like enzyme {ECO:0000313|EMBL:EKU96449.1}; TaxID=102129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7375.;"
dienelactone hydrolase-like enzyme
14_1009_05_20cm_scaffold_513_27
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25338..25616)
DNA (279bp) protein (93aa)
Erythromycin esterase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8N1D5_CORCM
erythromycin esterase
Erythromycin esterase {ECO:0000313|EMBL:AFE04263.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
Displaying 27 items

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