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14_1009_05_30cm_scaffold_1033

Search features with annotation key words

Displaying items 1-30 of 40 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_05_30cm_scaffold_1033_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..408)
DNA (408bp) protein (136aa)
Heme exporter protein CcmC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA41_GEMAT
ccmC; heme exporter protein CcmC
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_05_30cm_scaffold_1033_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(405..1085)
DNA (681bp) protein (227aa)
Heme exporter protein CcmB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA42_GEMAT
ccmB; heme exporter protein CcmB
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_1009_05_30cm_scaffold_1033_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1078..1794)
DNA (717bp) protein (239aa)
heme exporter protein CcmA id=24489893 bin=RBG_19FT_COMBO_GAL15_69_19 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
cytochrome ABC transporter ATP-binding component
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_1009_05_30cm_scaffold_1033_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1781..2155)
DNA (375bp) protein (125aa)
transcriptional regulator n=1 Tax=Streptomyces sp. FxanaD5 RepID=UPI00035DA3C9
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_05_30cm_scaffold_1033_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2204..2521)
DNA (318bp) protein (106aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_1009_05_30cm_scaffold_1033_6
RLO_PLX_64_10, Bacteria

Not on your lists

2792..4897
DNA (2106bp) protein (702aa)
Putative acetate--CoA ligase n=1 Tax=delta proteobacterium NaphS2 RepID=D8EYB7_9DELT
AMP-dependent synthetase and ligase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
14_1009_05_30cm_scaffold_1033_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4974..6872)
DNA (1899bp) protein (633aa)
Probable potassium transport system protein kup n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=KUP_MYXXD
kup; potassium uptake protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_05_30cm_scaffold_1033_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6884..7318)
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67L97_SYMTH
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_05_30cm_scaffold_1033_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7318..7986)
DNA (669bp) protein (223aa)
DSBA oxidoreductase n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A5N9_NITMS id=5103511 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DSBA oxidoreductase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_05_30cm_scaffold_1033_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7983..8291)
DNA (309bp) protein (103aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_05_30cm_scaffold_1033_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8483..8752
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA48_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_05_30cm_scaffold_1033_12
unknown

Not on your lists

comp(8701..8805)
DNA (105bp) protein (35aa)

This feature has no annotations

14_1009_05_30cm_scaffold_1033_13
unknown

Not on your lists

comp(8802..9227)
DNA (426bp) protein (142aa)

This feature has no annotations

14_1009_05_30cm_scaffold_1033_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9271..9654)
DNA (384bp) protein (128aa)
OsmC-like protein n=1 Tax=Providencia rettgeri DSM 1131 RepID=D4C1V3_PRORE
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_05_30cm_scaffold_1033_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9684..10208)
DNA (525bp) protein (175aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_05_30cm_scaffold_1033_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10205..10759)
DNA (555bp) protein (185aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003650ABC
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_1009_05_30cm_scaffold_1033_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

10796..11254
DNA (459bp) protein (153aa)
Cyclic nucleotide-binding domain-containing protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MHI7_CORCM
cyclic nucleotide-binding domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_1009_05_30cm_scaffold_1033_18
Roseivivax isoporae, Roseivivax, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11255..12049
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AAA536-G10 RepID=UPI000366D6FD
UDP-glucose pyrophosphorylase {ECO:0000313|EMBL:ETX29527.1}; TaxID=1449351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseivivax.;" source="Roseivivax isoporae LMG 25204.;"
UTP--glucose-1-phosphate uridylyltransferase
14_1009_05_30cm_scaffold_1033_19
unknown

Not on your lists

12046..13212
DNA (1167bp) protein (389aa)

This feature has no annotations

14_1009_05_30cm_scaffold_1033_20
Planktothrix agardhii, Planktothrix, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

13209..13574
DNA (366bp) protein (122aa)
S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00464}; Short=AdoMetDC {ECO:0000256|HAMAP-Rule:MF_00464};; Short=SAMDC {ECO:0000256|HAMAP-Rule:MF_00464};; EC=4.1.1.50 {ECO:0000256|HAMAP-Rule:MF_00464};; TaxID=388467 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Planktothrix.;" source="Planktothrix agardhii NIVA-CYA 126/8.;"
14_1009_05_30cm_scaffold_1033_21
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

13571..13960
DNA (390bp) protein (130aa)
DoxX family protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SIV8_9BACT
DoxX family protein {ECO:0000313|EMBL:BAL56094.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
DoxX family protein
14_1009_05_30cm_scaffold_1033_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14068..15195)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA53_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_05_30cm_scaffold_1033_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15282..16535
DNA (1254bp) protein (418aa)
rca:Rcas_3355 arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] id=1246557 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_05_30cm_scaffold_1033_24
unknown

Not on your lists

comp(16536..16751)
DNA (216bp) protein (72aa)

This feature has no annotations

14_1009_05_30cm_scaffold_1033_25
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16889..17557)
DNA (669bp) protein (223aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_1009_05_30cm_scaffold_1033_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17554..18165)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Desulfovibrio oxyclinae RepID=UPI000375EB3A
glycoside hydrolase family 13 protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_05_30cm_scaffold_1033_27
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(18162..18704)
DNA (543bp) protein (181aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5K6_GEMAT
RNA polymerase ECF-type sigma factor
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAH37516.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
14_1009_05_30cm_scaffold_1033_28
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(18819..20345)
DNA (1527bp) protein (509aa)
hypothetical protein; K06888 id=24560588 bin=RBG_19FT_COMBO_GAL15_69_19 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
14_1009_05_30cm_scaffold_1033_29
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

20879..21055
DNA (177bp) protein (59aa)
Putative uncharacterized protein n=1 Tax=bacterium Ellin514 RepID=B9XPD1_9BACT id=73381 bin=ACD51 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_1009_05_30cm_scaffold_1033_30
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(21115..21717)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YKB3_9BACT
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Displaying items 1-30 of 40 in total

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