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14_1009_05_30cm_scaffold_2580

Search features with annotation key words

Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_05_30cm_scaffold_2580_1
unknown

Not on your lists

comp(3..194)
DNA (192bp) protein (64aa)

This feature has no annotations

14_1009_05_30cm_scaffold_2580_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(324..902)
DNA (579bp) protein (193aa)
id=12557778 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_05_30cm_scaffold_2580_3
unknown

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comp(1043..1621)
DNA (579bp) protein (193aa)

This feature has no annotations

14_1009_05_30cm_scaffold_2580_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1867..2295
DNA (429bp) protein (143aa)
Nitrogen regulatory protein P-II n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A871_GEMAT
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:AHG93827.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
glnK; nitrogen regulatory protein P-II
14_1009_05_30cm_scaffold_2580_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2292..3617
DNA (1326bp) protein (442aa)
Ammonium transporter NrgA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A872_GEMAT
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
nrgA; ammonium transporter NrgA
14_1009_05_30cm_scaffold_2580_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3620..4336)
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI00037C189D
Polysaccharide deacetylase {ECO:0000313|EMBL:AHG89025.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
family 2 glycosyl transferase
14_1009_05_30cm_scaffold_2580_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4368..6110)
DNA (1743bp) protein (581aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA78_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_05_30cm_scaffold_2580_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

6218..6862
DNA (645bp) protein (215aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_05_30cm_scaffold_2580_trna_2
unknown

Not on your lists

comp(6912..6983)
DNA (72bp)
transferRNA Cys
14_1009_05_30cm_scaffold_2580_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

7128..7553
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADC5_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40502.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
14_1009_05_30cm_scaffold_2580_trna_1
unknown

Not on your lists

comp(7650..7721)
DNA (72bp)
transferRNA Cys
14_1009_05_30cm_scaffold_2580_10
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8160..8636
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LEX7_RALME
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF11299.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
14_1009_05_30cm_scaffold_2580_11
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(8623..9201)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XLJ5_9BACT
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
14_1009_05_30cm_scaffold_2580_12
Desulfatitalea sp. BRH_c12, Desulfatitalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9444..9803
DNA (360bp) protein (120aa)
Phosphohydrolase n=1 Tax=uncultured bacterium RepID=K1ZAL7_9BACT
NUDIX hydrolase {ECO:0000313|EMBL:KJS32559.1}; TaxID=1629708 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatitalea.;" source="Desulfatitalea sp. BRH_c12.;"
NUDIX hydrolase
14_1009_05_30cm_scaffold_2580_13
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

9903..10502
DNA (600bp) protein (200aa)
Transcriptional regulator n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DDW1_SINAD
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGA26846.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
14_1009_05_30cm_scaffold_2580_14
RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10499..11308
DNA (810bp) protein (270aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AWW2_HERA2
short-chain dehydrogenase/reductase SDR
Tax=RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated
14_1009_05_30cm_scaffold_2580_15
Paenibacillus lactis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11336..11851
DNA (516bp) protein (172aa)
DinB family protein n=1 Tax=Paenibacillus lactis 154 RepID=G4H9A6_9BACL
DinB family protein {ECO:0000313|EMBL:EHB68441.1}; TaxID=743719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus lactis 154.;"
hypothetical protein
14_1009_05_30cm_scaffold_2580_16
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11992..13146)
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI000366B0C1
Uncharacterized protein {ECO:0000313|EMBL:ETX02445.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
patatin
14_1009_05_30cm_scaffold_2580_17
uncultured proteobacterium, Proteobacteria, Bacteria

Not on your lists

comp(13173..13565)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3L4_9PROT
Ferredoxin {ECO:0000313|EMBL:CDL73012.1}; Flags: Fragment;; TaxID=153809 species="Bacteria; Proteobacteria; environmental samples.;" source="uncultured proteobacterium.;"
hypothetical protein
14_1009_05_30cm_scaffold_2580_18
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13744..13986)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G653_HERAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL61990.1}; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas arsenicoxydans.;"
14_1009_05_30cm_scaffold_2580_19
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(13986..14873)
DNA (888bp) protein (296aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
Tryptophan--tRNA ligase n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CXH3_TRURR
tryptophanyl-tRNA synthetase
Displaying 21 items

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