ggKbase home page

14_1009_05_30cm_scaffold_2584

Search features with annotation key words

Displaying 25 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_05_30cm_scaffold_2584_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

3..1181
DNA (1179bp) protein (393aa)
hemZ; oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22)
Oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4B7_GEMAT
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:AHG91007.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_1009_05_30cm_scaffold_2584_2
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

1210..2250
DNA (1041bp) protein (347aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4B6_GEMAT
hrcA; heat-inducible transcription repressor HrcA
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
14_1009_05_30cm_scaffold_2584_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

2247..3419
DNA (1173bp) protein (391aa)
Chaperone protein DnaJ n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4B5_GEMAT
dnaJ; chaperone protein DnaJ
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_1009_05_30cm_scaffold_2584_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3439..3777
DNA (339bp) protein (113aa)
Histidine triad (HIT) protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1V6_SPHTD
histidine triad (HIT) protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_05_30cm_scaffold_2584_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

3840..4028
DNA (189bp) protein (63aa)
30S ribosomal protein S21 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RS21_GEMAT
rpsU; 30S ribosomal protein S21
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_1009_05_30cm_scaffold_2584_6
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

4064..4474
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4B0_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH38935.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
14_1009_05_30cm_scaffold_2584_7
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

4471..6747
DNA (2277bp) protein (759aa)
Endonuclease MutS2 {ECO:0000255|HAMAP-Rule:MF_00092}; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00092};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Endonuclease MutS2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=MUTS2_GEMAT
DNA mismatch repair protein
14_1009_05_30cm_scaffold_2584_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

6769..8499
DNA (1731bp) protein (577aa)
dnaG; DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A8_GEMAT
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_05_30cm_scaffold_2584_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8483..9187
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A7_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_05_30cm_scaffold_2584_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

9184..10890
DNA (1707bp) protein (569aa)
recJ; single-stranded-DNA-specific exonuclease (EC:3.1.-.-)
Single-stranded-DNA-specific exonuclease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A6_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_05_30cm_scaffold_2584_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

10833..11507
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A5_GEMAT
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_05_30cm_scaffold_2584_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

11504..11989
DNA (486bp) protein (162aa)
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A4_GEMAT
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_1009_05_30cm_scaffold_2584_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

11986..12903
DNA (918bp) protein (306aa)
pta; phosphate acetyltransferase (EC:2.3.1.8)
Phosphate acetyltransferase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A885_MELRP id=5225279 bin=16ft_combo_ws3_JS1 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_05_30cm_scaffold_2584_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

12900..13235
DNA (336bp) protein (112aa)
Anti-sigma factor antagonist n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A2_GEMAT
putative anti sigma factor antagonist
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_1009_05_30cm_scaffold_2584_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

13244..13696
DNA (453bp) protein (151aa)
Response regulator receiver protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QFY3_DESB2
response regulator receiver protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_05_30cm_scaffold_2584_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

13711..15291
DNA (1581bp) protein (527aa)
Putative phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A0_GEMAT
putative phosphatase
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_1009_05_30cm_scaffold_2584_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


15288..16115
DNA (828bp) protein (276aa)
ksgA; dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A499_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_05_30cm_scaffold_2584_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16129..16749
DNA (621bp) protein (207aa)
Redox-sensing transcriptional repressor Rex n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A498_GEMAT
redox-sensing transcriptional repressor Rex
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_05_30cm_scaffold_2584_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16746..17978
DNA (1233bp) protein (411aa)
Arginine deiminase id=3915302 bin=GWF2_Bacteroidetes_41_31 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_05_30cm_scaffold_2584_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18083..18865
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A496_GEMAT
Beta-lactamase domain protein {ECO:0000313|EMBL:AHG90986.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
14_1009_05_30cm_scaffold_2584_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

19095..19583
DNA (489bp) protein (163aa)
Translation initiation factor IF-3 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A495_GEMAT
infC; translation initiation factor IF-3
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_05_30cm_scaffold_2584_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


19647..19841
DNA (195bp) protein (65aa)
50S ribosomal protein L35 n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WS24_KYRT2
50S ribosomal protein L35
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_05_30cm_scaffold_2584_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


19853..20206
DNA (354bp) protein (118aa)
50S ribosomal protein L20 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL20_GEMAT
rplT; 50S ribosomal protein L20
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_05_30cm_scaffold_2584_24
unknown

Not on your lists

comp(20745..21167)
DNA (423bp) protein (141aa)

This feature has no annotations

14_1009_05_30cm_scaffold_2584_25
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

21287..22075
DNA (789bp) protein (263aa)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HBJ1_ANADF
pheT; phenylalanyl-tRNA synthetase subunit beta
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Displaying 25 items

View Taxonomy