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14_1009_05_30cm_scaffold_251

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Displaying items 1-30 of 51 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_05_30cm_scaffold_251_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

33..1169
DNA (1137bp) protein (379aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_05_30cm_scaffold_251_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1276..3345
DNA (2070bp) protein (690aa)
HEAT-like repeat-containing protein n=1 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q74FB1_GEOSL
HEAT-like repeat-containing protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_05_30cm_scaffold_251_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3342..4520
DNA (1179bp) protein (393aa)
Cyclic diguanylate phosphodiesterase id=4963223 bin=GWA2_Deltaproteo_65_63 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_05_30cm_scaffold_251_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

4556..4951
DNA (396bp) protein (132aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_05_30cm_scaffold_251_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4955..6790)
DNA (1836bp) protein (612aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4X0_GEMAT
Protein kinase {ECO:0000313|EMBL:AHG91599.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
putative protein kinase
14_1009_05_30cm_scaffold_251_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6861..8045)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8M0_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_05_30cm_scaffold_251_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8042..9052)
DNA (1011bp) protein (337aa)
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADP9_GEMAT
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_05_30cm_scaffold_251_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9049..9465)
DNA (417bp) protein (139aa)
Two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8M2_GEMAT
Response regulator receiver {ECO:0000313|EMBL:AHG90709.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
two-component response regulator
14_1009_05_30cm_scaffold_251_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9481..9834)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8M3_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_05_30cm_scaffold_251_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

9929..10510
DNA (582bp) protein (194aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_05_30cm_scaffold_251_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10515..11801
DNA (1287bp) protein (429aa)
Serine--tRNA ligase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QDI4_9FIRM
seryl-tRNA synthetase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_05_30cm_scaffold_251_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

11791..13002
DNA (1212bp) protein (404aa)
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8M6_GEMAT
two-component histidine kinase
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_1009_05_30cm_scaffold_251_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

13007..15226
DNA (2220bp) protein (740aa)
ATP-dependent DNA helicase (EC:3.6.1.-) rbh
ATP-dependent DNA helicase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8M7_GEMAT rbh
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_05_30cm_scaffold_251_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15223..15525
DNA (303bp) protein (101aa)
asparaginyl/glutamyl-tRNA amidotransferase subunit C n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225E300
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_05_30cm_scaffold_251_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15522..16910
DNA (1389bp) protein (463aa)
gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8M9_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_05_30cm_scaffold_251_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

16907..18346
DNA (1440bp) protein (480aa)
gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8N0_GEMAT
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_1009_05_30cm_scaffold_251_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(18335..19303)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8N1_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_1009_05_30cm_scaffold_251_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(19264..19677)
DNA (414bp) protein (138aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_1009_05_30cm_scaffold_251_19
unknown

Not on your lists

comp(19684..20997)
DNA (1314bp) protein (438aa)

This feature has no annotations

14_1009_05_30cm_scaffold_251_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

21000..22307
DNA (1308bp) protein (436aa)
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Rhizobium sp. CF142 RepID=J2L3J3_9RHIZ
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_05_30cm_scaffold_251_21
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

22310..23140
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8N4_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_1009_05_30cm_scaffold_251_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

23208..23666
DNA (459bp) protein (153aa)
Ribosome maturation factor RimP n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RIMP_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_05_30cm_scaffold_251_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

23677..25041
DNA (1365bp) protein (455aa)
Transcription elongation protein NusA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8N6_GEMAT
nusA; transcription elongation protein NusA
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_05_30cm_scaffold_251_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

25038..25337
DNA (300bp) protein (100aa)
Ribosomal protein HS6-type (S12/L30/L7a) n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KNT3_9FIRM
ribosomal protein HS6-type (S12/L30/L7a)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_05_30cm_scaffold_251_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

25338..28004
DNA (2667bp) protein (889aa)
Translation initiation factor IF-2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8N8_GEMAT
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
infB; translation initiation factor IF-2
14_1009_05_30cm_scaffold_251_26
RBG_16_RIF05_58_8_curated, RIF5, Bacteria

Not on your lists

28023..28289
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DRZ4_DESRL
hypothetical protein
Tax=RBG_16_RIF05_58_8_curated
14_1009_05_30cm_scaffold_251_27
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

28291..28668
DNA (378bp) protein (126aa)
Ribosome-binding factor A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RBFA_GEMAT
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
rbfA; ribosome-binding factor A
14_1009_05_30cm_scaffold_251_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28677..29519
DNA (843bp) protein (281aa)
truB; tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] id=12555519 bin=CNBR_ACIDO species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (str
tRNA pseudouridine synthase B
14_1009_05_30cm_scaffold_251_29
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

29516..30427
DNA (912bp) protein (304aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ribF; riboflavin kinase/FMN adenylyltransferase (EC:2.7.1.26 2.7.7.2)
Riboflavin kinase/FMN adenylyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8P1_GEMAT
14_1009_05_30cm_scaffold_251_30
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

30434..32104
DNA (1671bp) protein (557aa)
Protein translocase subunit SecD n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SECD_GEMAT
secD; protein-export membrane protein SecD
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Displaying items 1-30 of 51 in total

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