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14_1009_05_30cm_scaffold_293

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Displaying items 1-30 of 45 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_05_30cm_scaffold_293_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

3..662
DNA (660bp) protein (220aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_1009_05_30cm_scaffold_293_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

668..1303
DNA (636bp) protein (212aa)
Putative uncharacterized protein id=3290479 bin=GWC2_Chloroflexi_73_18 species=Nocardiopsis dassonvillei genus=Nocardiopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_1009_05_30cm_scaffold_293_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(1318..2538)
DNA (1221bp) protein (407aa)
Tetracycline resistance protein, class C n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7N3N4_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_1009_05_30cm_scaffold_293_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

2583..3881
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5W8_GEMAT
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_1009_05_30cm_scaffold_293_5
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

3923..5122
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P851_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43683.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
14_1009_05_30cm_scaffold_293_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5126..6232
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036F9451
Oxidoreductase domain protein {ECO:0000313|EMBL:AHG93490.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
14_1009_05_30cm_scaffold_293_7
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6239..7135)
DNA (897bp) protein (299aa)
Beta-lactamase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QP24_9DELT
Beta-lactamase {ECO:0000313|EMBL:EPX58313.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
beta-lactamase
14_1009_05_30cm_scaffold_293_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

7188..10790
DNA (3603bp) protein (1201aa)
2-oxoglutarate dehydrogenase, E1 subunit n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCK1_CONWI
2-oxoglutarate dehydrogenase, E1 subunit
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_1009_05_30cm_scaffold_293_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10787..11725
DNA (939bp) protein (313aa)
Kelch repeat-containing protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHL5_9BACT
Kelch repeat-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
14_1009_05_30cm_scaffold_293_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

11727..12302
DNA (576bp) protein (192aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5S9_GEMAT
hypothetical membrane protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_05_30cm_scaffold_293_11
unknown

Not on your lists

12343..12495
DNA (153bp) protein (51aa)

This feature has no annotations

14_1009_05_30cm_scaffold_293_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12496..13506)
DNA (1011bp) protein (337aa)
qxtB; terminal oxidase subunit II (EC:1.10.3.-)
Probable terminal oxidase subunit II {ECO:0000313|EMBL:CAN92597.1}; EC=1.10.3.- {ECO:0000313|EMBL:CAN92597.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Probable terminal oxidase subunit II n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G2B1_SORC5
14_1009_05_30cm_scaffold_293_13
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13503..14864)
DNA (1362bp) protein (454aa)
cytochrome BD ubiquinol oxidase subunit I n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B6CDCA
cytochrome bd ubiquinol oxidase subunit I rbh
Cytochrome bd ubiquinol oxidase subunit I {ECO:0000313|EMBL:ACL64348.1}; Flags: Precursor;; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258).;"
14_1009_05_30cm_scaffold_293_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14874..15701)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PJK9_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_05_30cm_scaffold_293_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15840..17675
DNA (1836bp) protein (612aa)
Methylenetetrahydrofolate reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5U0_GEMAT
bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_05_30cm_scaffold_293_16

Not on your lists

17768..18187
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_009L19 RepID=B3T1G8_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ABZ06427.1}; TaxID=455516 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_009L19.;"
integral membrane protein
14_1009_05_30cm_scaffold_293_17
unknown

Not on your lists

comp(18192..18326)
DNA (135bp) protein (45aa)

This feature has no annotations

14_1009_05_30cm_scaffold_293_18
unknown

Not on your lists

comp(18335..18670)
DNA (336bp) protein (112aa)

This feature has no annotations

14_1009_05_30cm_scaffold_293_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18768..20102
DNA (1335bp) protein (445aa)
Amino acid/polyamine/organocation transporter, APC superfamily n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJW5_KORVE
Amino acid permease {ECO:0000313|EMBL:AHG93630.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
amino acid transporter
14_1009_05_30cm_scaffold_293_20
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20099..21439
DNA (1341bp) protein (447aa)
hypothetical protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B545DF
Uncharacterized protein {ECO:0000313|EMBL:AII53166.1}; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
YcgA
14_1009_05_30cm_scaffold_293_21
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

21482..22171
DNA (690bp) protein (230aa)
Putative membrane associated protein n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0STG7_PLABD
membrane associated protein
Putative membrane associated protein {ECO:0000313|EMBL:ADY60429.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
14_1009_05_30cm_scaffold_293_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

22168..22647
DNA (480bp) protein (160aa)
Putative uncharacterized protein n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BFN8_MEISD
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_05_30cm_scaffold_293_23
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22631..23017)
DNA (387bp) protein (129aa)
RNA-binding S4 domain protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LZ35_HALO1
RNA-binding S4 domain-containing protein
RNA-binding S4 domain protein {ECO:0000313|EMBL:ACY14505.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
14_1009_05_30cm_scaffold_293_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23007..24083)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAU0_GEMAT id=5223895 bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Uncharacterized protein {ECO:0000313|EMBL:AHG92024.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
14_1009_05_30cm_scaffold_293_25
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

24244..24690
DNA (447bp) protein (149aa)
hypothetical protein id=7718871 bin=BACIGN_2 species=Porphyromonas gingivalis genus=Porphyromonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
membrane protease regulatory membrane protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
14_1009_05_30cm_scaffold_293_26
Porphyromonas catoniae, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24692..25708
DNA (1017bp) protein (339aa)
SPFH/Band 7/PHB domain protein n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NJ47_9PORP
SPFH/Band 7/PHB domain protein {ECO:0000313|EMBL:EKY03388.1}; TaxID=1127696 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas catoniae F0037.;"
hypothetical protein
14_1009_05_30cm_scaffold_293_27
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25705..26967
DNA (1263bp) protein (421aa)
L-sorbosone dehydrogenase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C4F9_NITHN
L-sorbosone dehydrogenase
L-sorbosone dehydrogenase {ECO:0000313|EMBL:ADE15143.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
14_1009_05_30cm_scaffold_293_28
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

26964..27407
DNA (444bp) protein (148aa)
Bll7145 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89EE0_BRADU
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_1009_05_30cm_scaffold_293_29
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27404..28573
DNA (1170bp) protein (390aa)
acyl-CoA dehydrogenase (EC:1.3.8.1)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XXQ0_9BACT
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ETX05175.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
14_1009_05_30cm_scaffold_293_30
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

28588..29745
DNA (1158bp) protein (386aa)
aminotransferase (EC:2.6.1.-) id=24561144 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
aminotransferase (EC:2.6.1.-)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
Displaying items 1-30 of 45 in total

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