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14_1009_05_30cm_scaffold_317

Search features with annotation key words

Displaying items 1-30 of 59 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_05_30cm_scaffold_317_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3..524
DNA (522bp) protein (174aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A692_GEMAT
RNA polymerase sigma factor
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_05_30cm_scaffold_317_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

641..1405
DNA (765bp) protein (255aa)
Putative transporter n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEH0_GEMAT
putative transporter
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_05_30cm_scaffold_317_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1402..2127
DNA (726bp) protein (242aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A693_GEMAT
putative ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_05_30cm_scaffold_317_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

2124..3131
DNA (1008bp) protein (336aa)
Putative transporter n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEH1_GEMAT
putative transporter
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_05_30cm_scaffold_317_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

3255..3722
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A694_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_1009_05_30cm_scaffold_317_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3719..4495
DNA (777bp) protein (259aa)
AraC family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A695_GEMAT
AraC family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_05_30cm_scaffold_317_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

4651..6192
DNA (1542bp) protein (514aa)
atpA; ATP synthase alpha chain (EC:3.6.3.14) rbh
ATP synthase subunit alpha n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A696_GEMAT rbh
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_05_30cm_scaffold_317_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

6192..7067
DNA (876bp) protein (292aa)
atpG; F0F1 ATP synthase subunit gamma (EC:3.6.3.14) rbh
ATP synthase gamma chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=ATPG_GEMAT rbh
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_05_30cm_scaffold_317_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

7079..8533
DNA (1455bp) protein (485aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
atpD; ATP synthase beta chain (EC:3.6.3.14)
ATP synthase subunit beta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A698_GEMAT
14_1009_05_30cm_scaffold_317_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8537..8785
DNA (249bp) protein (83aa)
atpC; ATP synthase epsilon chain (EC:3.6.3.14)
ATP synthase epsilon chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A699_GEMAT
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_05_30cm_scaffold_317_11
unknown

Not on your lists

8834..9367
DNA (534bp) protein (178aa)

This feature has no annotations

14_1009_05_30cm_scaffold_317_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

9385..9996
DNA (612bp) protein (204aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_05_30cm_scaffold_317_13
unknown

Not on your lists

10110..10766
DNA (657bp) protein (219aa)

This feature has no annotations

14_1009_05_30cm_scaffold_317_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10848..11216
DNA (369bp) protein (123aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_05_30cm_scaffold_317_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11290..12597)
DNA (1308bp) protein (436aa)
putative glycosyltransferase (EC:2.4.-.-)
Putative glycosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6A7_GEMAT
Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein {ECO:0000313|EMBL:AHG90178.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_1009_05_30cm_scaffold_317_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(12597..13232)
DNA (636bp) protein (212aa)
DSBA oxidoreductase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NQB1_ROSCS
DSBA oxidoreductase
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_1009_05_30cm_scaffold_317_17
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13463..14464
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035FB1A0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU63682.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
14_1009_05_30cm_scaffold_317_18

Not on your lists

comp(14471..16411)
DNA (1941bp) protein (647aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00037F00E3
Marine sediment metagenome DNA, contig: S01H1_S13969 {ECO:0000313|EMBL:GAG11941.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ASPIC/UnbV domain-containing protein
14_1009_05_30cm_scaffold_317_19
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(16417..16977)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003806AE9
cytochrome C, class I
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
14_1009_05_30cm_scaffold_317_20
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(16995..18200)
DNA (1206bp) protein (402aa)
Oxidoreductase molybdopterin binding n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PEL7_CHIPD
molybdopterin binding oxidoreductase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
14_1009_05_30cm_scaffold_317_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18279..19847
DNA (1569bp) protein (523aa)
hypothetical protein rbh
hypothetical protein id=24657759 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber rbh
Tetratricopeptide repeat family {ECO:0000313|EMBL:ABC44172.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain DSM 13855 / M31).;"
14_1009_05_30cm_scaffold_317_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19844..20530)
DNA (687bp) protein (229aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_05_30cm_scaffold_317_23
RBG_13_Bacteroidetes_43_22_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20791..24105
DNA (3315bp) protein (1105aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI0003782CED
tonb-dependent receptor
Tax=RBG_13_Bacteroidetes_43_22_curated
14_1009_05_30cm_scaffold_317_24
unknown

Not on your lists

24141..25991
DNA (1851bp) protein (617aa)

This feature has no annotations

14_1009_05_30cm_scaffold_317_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

26059..29730
DNA (3672bp) protein (1224aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00036781DA
ASPIC/UnbV domain protein {ECO:0000313|EMBL:AHG89290.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ASPIC/UnbV domain-containing protein
14_1009_05_30cm_scaffold_317_26
unknown

Not on your lists

29753..30847
DNA (1095bp) protein (365aa)

This feature has no annotations

14_1009_05_30cm_scaffold_317_27
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

31196..34123
DNA (2928bp) protein (976aa)
TonB-dependent outer membrane receptor n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0M0T4_GRAFK
TonB-dependent outer membrane protein, SusC/RagA {ECO:0000313|EMBL:AHG89359.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
TonB-dependent outer membrane receptor
14_1009_05_30cm_scaffold_317_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

34140..35639
DNA (1500bp) protein (500aa)
Membrane or secreted protein n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0M0T5_GRAFK
Membrane or secreted protein {ECO:0000313|EMBL:AHG90171.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
14_1009_05_30cm_scaffold_317_29
unknown

Not on your lists

comp(35696..36148)
DNA (453bp) protein (151aa)

This feature has no annotations

14_1009_05_30cm_scaffold_317_30
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

36206..36982
DNA (777bp) protein (259aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6A9_GEMAT
hypothetical membrane protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Displaying items 1-30 of 59 in total

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