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14_1009_05_40cm_scaffold_28351

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_05_40cm_scaffold_28351_1
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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3..401
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI000363CB85
folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD
Tax=RBG_16_Euryarchaeota_68_13_curated
14_1009_05_40cm_scaffold_28351_2
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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449..793
DNA (345bp) protein (115aa)
Lactoylglutathione lyase family protein {ECO:0000313|EMBL:EXG81484.1}; EC=5.1.99.1 {ECO:0000313|EMBL:EXG81484.1};; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
Uncharacterized protein n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5B6L3_9MICO
hypothetical protein
14_1009_05_40cm_scaffold_28351_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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859..2184
DNA (1326bp) protein (442aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TBZ3_9EURY
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_05_40cm_scaffold_28351_4
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

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2558..2722
DNA (165bp) protein (55aa)
Tax=RBG_16_Chloroflexi_52_11_curated
14_1009_05_40cm_scaffold_28351_5
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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2809..3195
DNA (387bp) protein (129aa)
protein-methionine-S-oxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y768_NITMU
14_1009_05_40cm_scaffold_28351_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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3261..3896
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000372E0F1
putative RNA-binding protein of the translin family
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_05_40cm_scaffold_28351_7
unknown

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4064..4528
DNA (465bp) protein (155aa)

This feature has no annotations

14_1009_05_40cm_scaffold_28351_8
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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4677..5567
DNA (891bp) protein (297aa)
ATPase RecA-superfamily n=1 Tax=uncultured euryarchaeote Alv-FOS4 RepID=Q3SA55_9EURY
putative circadian clock protein KaiC
Tax=RBG_16_Euryarchaeota_68_13_curated
14_1009_05_40cm_scaffold_28351_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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5568..6356
DNA (789bp) protein (263aa)
Putative uncharacterized protein n=1 Tax=uncultured euryarchaeote Alv-FOS4 RepID=Q3SA54_9EURY
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_05_40cm_scaffold_28351_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

6521..6931
DNA (411bp) protein (137aa)
UPI0003D1BEAC related cluster n=1 Tax=unknown RepID=UPI0003D1BEAC
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_05_40cm_scaffold_28351_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

6933..7544
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MFV5_9EURY
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_05_40cm_scaffold_28351_12
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(7545..8288)
DNA (744bp) protein (248aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
14_1009_05_40cm_scaffold_28351_13
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(8304..9221)
DNA (918bp) protein (306aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
Displaying 13 items

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