ggKbase home page

14_1009_09_30cm_scaffold_177

Search features with annotation key words

Displaying items 1-30 of 54 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_09_30cm_scaffold_177_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


1..198
DNA (198bp) protein (66aa)
50S ribosomal protein L27 n=221 Tax=Clostridium difficile RepID=RL27_CLOD6
rpmA; 50S ribosomal protein L27
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_09_30cm_scaffold_177_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(754..1962)
DNA (1209bp) protein (403aa)
Imidazolonepropionase n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y3F7_9PROT
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:AHG90871.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_1009_09_30cm_scaffold_177_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1959..3377)
DNA (1419bp) protein (473aa)
amidohydrolase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B5895F
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:AHG90870.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_1009_09_30cm_scaffold_177_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(3401..5434)
DNA (2034bp) protein (678aa)
peptidase M16 domain-containing protein id=12557819 bin=CNBR_ACIDO species=Brevundimonas subvibrioides genus=Brevundimonas taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
processing protease
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_1009_09_30cm_scaffold_177_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(5512..6867)
DNA (1356bp) protein (452aa)
Peptidase S16B family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEN4_GEMAT
Predicted Zn-dependent peptidase {ECO:0000313|EMBL:CDM66642.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
peptidase S16B family protein
14_1009_09_30cm_scaffold_177_6
unknown

Not on your lists

comp(6876..7640)
DNA (765bp) protein (255aa)

This feature has no annotations

14_1009_09_30cm_scaffold_177_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7609..8499)
DNA (891bp) protein (297aa)
Amidohydrolase 2 n=1 Tax=mine drainage metagenome RepID=T1BXN0_9ZZZZ
amidohydrolase 2
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_09_30cm_scaffold_177_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

8721..10190
DNA (1470bp) protein (490aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U3T9_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH81177.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
14_1009_09_30cm_scaffold_177_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10233..11075)
DNA (843bp) protein (281aa)
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LTX8_HALO1
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_09_30cm_scaffold_177_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(11087..11794)
DNA (708bp) protein (236aa)
Glycerophosphoryl diester phosphodiesterase family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A928_GEMAT
glycerophosphoryl diester phosphodiesterase family protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_1009_09_30cm_scaffold_177_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(11791..12915)
DNA (1125bp) protein (375aa)
Benzoyl-CoA oxygenase component B id=1975393 bin=GWD2_Deltaproteobacteria_55_8 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
benzoyl-CoA oxygenase
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_1009_09_30cm_scaffold_177_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12915..13673)
DNA (759bp) protein (253aa)
Enoyl-CoA hydratase/isomerase id=4793456 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus metallidurans genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phenylacetate degradation, enoyl-CoA hydratase paaB
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_09_30cm_scaffold_177_13
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(13673..14872)
DNA (1200bp) protein (400aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67RI8_SYMTH
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
14_1009_09_30cm_scaffold_177_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14901..16328)
DNA (1428bp) protein (476aa)
Aldehyde Dehydrogenase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MJ64_9BACT
NAD-dependent aldehyde dehydrogenase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_09_30cm_scaffold_177_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16325..17140)
DNA (816bp) protein (272aa)
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.17)
Enoyl-CoA hydratase/isomerase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0L6T3_9BACT
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_09_30cm_scaffold_177_16
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17147..17746)
DNA (600bp) protein (200aa)
TetR-family transcriptional regulator id=1804082 bin=GWD2_Deltaproteobacteria_55_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
TetR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
14_1009_09_30cm_scaffold_177_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

17934..18485
DNA (552bp) protein (184aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A927_GEMAT
RNA polymerase ECF-type sigma factor
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_09_30cm_scaffold_177_18
unknown

Not on your lists

18482..18916
DNA (435bp) protein (145aa)

This feature has no annotations

14_1009_09_30cm_scaffold_177_19
Leptonema illini, Leptonema, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

18916..19482
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Leptonema illini DSM 21528 RepID=H2CCH2_9LEPT
Uncharacterized protein {ECO:0000313|EMBL:EHQ07432.1}; Flags: Precursor;; TaxID=929563 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptonema.;" source="Leptonema illini DSM 21528.;"
14_1009_09_30cm_scaffold_177_20
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(19534..20382)
DNA (849bp) protein (283aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
14_1009_09_30cm_scaffold_177_21
unknown

Not on your lists

comp(20641..21096)
DNA (456bp) protein (152aa)

This feature has no annotations

14_1009_09_30cm_scaffold_177_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

21304..21612
DNA (309bp) protein (103aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_09_30cm_scaffold_177_trna_1
unknown

Not on your lists

21619..21701
DNA (83bp)
transferRNA Leu
14_1009_09_30cm_scaffold_177_23
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21891..23951
DNA (2061bp) protein (687aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JJ95_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR68870.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
14_1009_09_30cm_scaffold_177_24
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24038..24760
DNA (723bp) protein (241aa)
Conserved hypothetical lipoprotein n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L0E1_ZOBGA
lipoprotein
Conserved hypothetical lipoprotein {ECO:0000313|EMBL:CAZ94354.1}; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zobellia.;" source="Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871; / Dsij).;"
14_1009_09_30cm_scaffold_177_25
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24757..26061)
DNA (1305bp) protein (435aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00036F7374
Uncharacterized protein {ECO:0000313|EMBL:EST34272.1}; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp. oscitans DS 12.976.;"
phosphoesterase
14_1009_09_30cm_scaffold_177_26
unknown

Not on your lists

26224..26676
DNA (453bp) protein (151aa)

This feature has no annotations

14_1009_09_30cm_scaffold_177_27
unknown

Not on your lists

26686..27078
DNA (393bp) protein (131aa)

This feature has no annotations

14_1009_09_30cm_scaffold_177_28
unknown

Not on your lists

27136..27498
DNA (363bp) protein (121aa)

This feature has no annotations

14_1009_09_30cm_scaffold_177_29
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27523..27966)
DNA (444bp) protein (148aa)
Putative hemagglutinin/hemolysin-related protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08VE1_STIAD
Uncharacterized protein {ECO:0000313|EMBL:KFE72161.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
peptidase families s8 and s53 domain-containing protein
Displaying items 1-30 of 54 in total

View Taxonomy