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14_1009_09_40cm_scaffold_1861

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_09_40cm_scaffold_1861_1
unknown

Not on your lists

comp(3..323)
DNA (321bp) protein (107aa)

This feature has no annotations

14_1009_09_40cm_scaffold_1861_2
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(442..978)
DNA (537bp) protein (179aa)
thiamine-phosphate diphosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZK7_9BACT
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
14_1009_09_40cm_scaffold_1861_3
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(975..1241)
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024M3_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
14_1009_09_40cm_scaffold_1861_4
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists


comp(1312..1662)
DNA (351bp) protein (117aa)
50S ribosomal protein L19 n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SIU3_9BACT
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
50S ribosomal protein L19
14_1009_09_40cm_scaffold_1861_5
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(1674..2366)
DNA (693bp) protein (231aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SIU4_9BACT
tRNA (Guanine37-N(1)-) methyltransferase
14_1009_09_40cm_scaffold_1861_6
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(2363..2767)
DNA (405bp) protein (135aa)
Ribosome maturation factor RimM n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=RIMM_SYNFM
16S rRNA processing protein RimM
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
14_1009_09_40cm_scaffold_1861_7
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(2900..3130)
DNA (231bp) protein (77aa)
UPF0109 protein Acid_2571 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024L6_SOLUE
RNA-binding protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
14_1009_09_40cm_scaffold_1861_8
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists


comp(3262..3510)
DNA (249bp) protein (83aa)
30S ribosomal protein S16 n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IHT3_9CHLR
SSU ribosomal protein S16p
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
14_1009_09_40cm_scaffold_1861_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists


comp(3556..4899)
DNA (1344bp) protein (448aa)
Signal recognition particle protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024L4_SOLUE rbh
signal recognition particle subunit FFH/SRP54 (srp54) rbh
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_1009_09_40cm_scaffold_1861_10
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(4917..5693)
DNA (777bp) protein (259aa)
metallophosphoesterase; K09769 hypothetical protein id=7201253 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06 rbh
metallophosphoesterase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
14_1009_09_40cm_scaffold_1861_11
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5977..6255)
DNA (279bp) protein (93aa)
Tax=RBG_13_Deltaproteobacteria_52_11_curated
14_1009_09_40cm_scaffold_1861_12
unknown

Not on your lists

comp(6248..6481)
DNA (234bp) protein (78aa)

This feature has no annotations

14_1009_09_40cm_scaffold_1861_13
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists


comp(6492..8507)
DNA (2016bp) protein (672aa)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITS7_KORVE
phenylalanyl-tRNA synthetase subunit beta
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
14_1009_09_40cm_scaffold_1861_14
Thermoanaerobacter sp. YS13, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(8504..9544)
DNA (1041bp) protein (347aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1511746 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter sp. YS13.;"
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Thermoanaerobacter ethanolicus CCSD1 RepID=C7IR05_THEET
14_1009_09_40cm_scaffold_1861_15
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists


comp(9575..9940)
DNA (366bp) protein (122aa)
50S ribosomal protein L20 n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=RL20_THERP
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000255|HAMAP-Rule:MF_00382}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
14_1009_09_40cm_scaffold_1861_16
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(10151..10660)
DNA (510bp) protein (170aa)
Translation initiation factor IF-3 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITT2_KORVE
translation initiation factor 3
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
14_1009_09_40cm_scaffold_1861_17
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

11088..12869
DNA (1782bp) protein (594aa)
thrS; threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] id=12557837 bin=CNBR_ACIDO species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
14_1009_09_40cm_scaffold_1861_18
unknown

Not on your lists

comp(12942..13190)
DNA (249bp) protein (83aa)

This feature has no annotations

Displaying 18 items

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