ggKbase home page

14_1009_09_40cm_scaffold_8890

Search features with annotation key words

Displaying 24 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_09_40cm_scaffold_8890_1
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(34..345)
DNA (312bp) protein (104aa)
cytochrome C oxidase subunit IV; K02277 cytochrome c oxidase subunit IV [EC:1.9.3.1] id=14632977 bin=bin9_gal15 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
cytochrome C oxidase subunit IV
Tax=CSP1_3_Armatimonadetes
14_1009_09_40cm_scaffold_8890_2
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(373..996)
DNA (624bp) protein (208aa)
Heme/copper-type cytochrome/quinol oxidase, subunit 3 n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q0I3_9FIRM
Heme/copper-type cytochrome/quinol oxidase, subunit 3 {ECO:0000313|EMBL:EKP94414.1}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
cytochrome C oxidase subunit III
14_1009_09_40cm_scaffold_8890_3
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1009..1647)
DNA (639bp) protein (213aa)
Cytochrome c oxidase subunit III n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NMV5_MARHT
cytochrome c oxidase subunit III
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
14_1009_09_40cm_scaffold_8890_4
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(1657..3426)
DNA (1770bp) protein (590aa)
cytochrome C oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] id=14632980 bin=bin9_gal15 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
cytochrome C oxidase subunit I (EC:1.9.3.1)
Tax=CSP1_3_Armatimonadetes
14_1009_09_40cm_scaffold_8890_5
uncultured Acetothermia bacterium, Acetothermia, Bacteria

Not on your lists

comp(3441..4235)
DNA (795bp) protein (265aa)
Cytochrome c oxidase subunit II n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SU32_9BACT
Cytochrome c oxidase subunit II {ECO:0000313|EMBL:BAL54896.1}; TaxID=236499 species="Bacteria; Acetothermia; environmental samples.;" source="uncultured Acetothermia bacterium.;"
cytochrome c oxidase subunit II
14_1009_09_40cm_scaffold_8890_6
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

4399..5664
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000367E546 rbh
Sugar phosphate permease {ECO:0000313|EMBL:EIP97688.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
MFS transporter
14_1009_09_40cm_scaffold_8890_7
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

5766..7433
DNA (1668bp) protein (556aa)
hypothetical protein n=1 Tax=Nevskia ramosa RepID=UPI0003B5DAA8 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADW68695.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
14_1009_09_40cm_scaffold_8890_8
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

7437..8828
DNA (1392bp) protein (464aa)
hypothetical protein n=1 Tax=Nevskia ramosa RepID=UPI0003B6DAB0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW68696.1}; Flags: Precursor;; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
14_1009_09_40cm_scaffold_8890_9
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

8884..9573
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003612C2E
Carboxymuconolactone decarboxylase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
14_1009_09_40cm_scaffold_8890_10
unknown

Not on your lists

comp(9629..9838)
DNA (210bp) protein (70aa)

This feature has no annotations

14_1009_09_40cm_scaffold_8890_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

10148..11191
DNA (1044bp) protein (348aa)
SMP-30/gluconolaconase/LRE domain-containing protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZH35_9GAMM
SMP-30/gluconolaconase/LRE domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
14_1009_09_40cm_scaffold_8890_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

11363..11692
DNA (330bp) protein (110aa)
ATP-dependent Clp protease adaptor protein ClpS n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029R9_SOLUE
ATP-dependent Clp protease adaptor protein ClpS
ATP-dependent Clp protease adaptor protein ClpS {ECO:0000313|EMBL:ABJ82207.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_1009_09_40cm_scaffold_8890_13
RLO_Omnitrophica_50_11, Omnitrophica, Bacteria

Not on your lists

comp(11744..12019)
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B51D18
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Omnitrophica_50_11_curated
14_1009_09_40cm_scaffold_8890_14
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(12088..12594)
DNA (507bp) protein (169aa)
mrp; protein mrp id=14632742 bin=bin9_gal15 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
ATP-binding protein
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
14_1009_09_40cm_scaffold_8890_15
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(12584..13093)
DNA (510bp) protein (170aa)
mrp; protein mrp id=14632742 bin=bin9_gal15 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
mrp; protein mrp
Tax=CSP1_3_Armatimonadetes
14_1009_09_40cm_scaffold_8890_16
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(13122..14330)
DNA (1209bp) protein (403aa)
threonine synthase (EC:4.2.3.1) rbh
L-threonine synthase {ECO:0000313|EMBL:ABJ81552.1}; EC=4.2.3.1 {ECO:0000313|EMBL:ABJ81552.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
L-threonine synthase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02BL4_SOLUE rbh
14_1009_09_40cm_scaffold_8890_17
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(14406..15470)
DNA (1065bp) protein (355aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8P165_GRAMM
UDP-N-acetylenolpyruvoylglucosamine reductase
14_1009_09_40cm_scaffold_8890_18
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

15501..16817
DNA (1317bp) protein (439aa)
sodium:solute symporter n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B4FEC7 rbh
putative sodium/solute symporter
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
14_1009_09_40cm_scaffold_8890_19
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

16814..17845
DNA (1032bp) protein (344aa)
peptidase S58 n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B4D438
Tat pathway signal sequence domain-containing protein 22
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
14_1009_09_40cm_scaffold_8890_20
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17842..18441)
DNA (600bp) protein (200aa)
2OG-Fe(II) oxygenase n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2K4Y9_9BURK
2OG-Fe(II) oxygenase {ECO:0000313|EMBL:ESJ21498.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
2OG-Fe(II) oxygenase
14_1009_09_40cm_scaffold_8890_21
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

18742..19146
DNA (405bp) protein (135aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
14_1009_09_40cm_scaffold_8890_22
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

19112..19591
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WHE4_9SPHN
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
14_1009_09_40cm_scaffold_8890_23
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

19956..20963
DNA (1008bp) protein (336aa)
beta-lactamase n=1 Tax=Variovorax paradoxus RepID=UPI00037BAB37
metallo-beta-lactamase superfamily protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
14_1009_09_40cm_scaffold_8890_24
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(20965..21351)
DNA (387bp) protein (129aa)
Sorbose dehydrogenase n=1 Tax=Ketogulonicigenium vulgare (strain Y25) RepID=E3F069_KETVY
precursor of SSDA1
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Displaying 24 items

View Taxonomy