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14_1009_13_20cm_scaffold_4525

Search features with annotation key words

Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_13_20cm_scaffold_4525_1
unknown

Not on your lists

comp(3..422)
DNA (420bp) protein (140aa)

This feature has no annotations

14_1009_13_20cm_scaffold_4525_2
unknown

Not on your lists

2005..2313
DNA (309bp) protein (103aa)

This feature has no annotations

14_1009_13_20cm_scaffold_4525_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(2800..3048)
DNA (249bp) protein (83aa)
Peptidase M24 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIU2_KORVE
peptidase M24
Peptidase M24 {ECO:0000313|EMBL:ABF43208.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
14_1009_13_20cm_scaffold_4525_4
unknown

Not on your lists

comp(3073..3384)
DNA (312bp) protein (104aa)
hypothetical protein
14_1009_13_20cm_scaffold_4525_5
unknown

Not on your lists

comp(3405..3596)
DNA (192bp) protein (64aa)

This feature has no annotations

14_1009_13_20cm_scaffold_4525_6

Not on your lists

comp(3710..4300)
DNA (591bp) protein (197aa)
Class V aminotransferase {ECO:0000313|EMBL:KHO51976.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Glutathione peroxidase id=2260201 bin=GWB2_Elusimicrobia_63_16 species=marine gamma proteobacterium HTCC2148 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
putative cysteine desulfurase/selenocysteine lyase
14_1009_13_20cm_scaffold_4525_7

Not on your lists

comp(4338..4862)
DNA (525bp) protein (175aa)
Class V aminotransferase {ECO:0000313|EMBL:KHO51976.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Glutathione peroxidase id=3529959 bin=GWA2_Elusi-like_A8_64_40 species=marine gamma proteobacterium HTCC2148 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusi-like_A8_64_40 organism_group=Elusimicrobia
class V aminotransferase
14_1009_13_20cm_scaffold_4525_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(4945..5262)
DNA (318bp) protein (106aa)
Putative 10 TMS drug/metabolite exporter, DME family, DMT superfamily n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1II14_KORVE
DMT family permease
Putative 10 TMS drug/metabolite exporter, DME family, DMT superfamily {ECO:0000313|EMBL:ABF43486.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
14_1009_13_20cm_scaffold_4525_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5271..5765)
DNA (495bp) protein (165aa)
membrane protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B6954A
DMT family permease
Putative 10 TMS drug/metabolite exporter, DME family, DMT superfamily {ECO:0000313|EMBL:ABF43486.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
14_1009_13_20cm_scaffold_4525_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5885..6058)
DNA (174bp) protein (58aa)
Antibiotic biosynthesis monooxygenase domain protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IH84_KORVE
antibiotic biosynthesis monooxygenase domain-containing protein
Antibiotic biosynthesis monooxygenase domain protein {ECO:0000313|EMBL:ABF43766.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
14_1009_13_20cm_scaffold_4525_11
unknown

Not on your lists

comp(6055..6216)
DNA (162bp) protein (54aa)

This feature has no annotations

14_1009_13_20cm_scaffold_4525_12
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6298..7215
DNA (918bp) protein (306aa)
Transcriptional regulatory protein n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AG52_COLFT
Helix-turn-helix, AraC domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
14_1009_13_20cm_scaffold_4525_13
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

7520..8587
DNA (1068bp) protein (356aa)
Site-specific recombinase XerD n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZJK6_TERRK
site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:AFL89424.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63).;"
14_1009_13_20cm_scaffold_4525_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(9429..11630)
DNA (2202bp) protein (734aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IST1_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF40069.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
14_1009_13_20cm_scaffold_4525_15
unknown

Not on your lists

comp(11627..11746)
DNA (120bp) protein (40aa)

This feature has no annotations

14_1009_13_20cm_scaffold_4525_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(12422..13114)
DNA (693bp) protein (231aa)
RNA polymerase sigma factor n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IN56_KORVE
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
14_1009_13_20cm_scaffold_4525_17
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(13203..13373)
DNA (171bp) protein (57aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJ96_KORVE
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABF43054.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
Displaying 17 items

View Taxonomy