ggKbase home page

14_1009_13_30cm_scaffold_3163

Search features with annotation key words

Displaying 14 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_13_30cm_scaffold_3163_1
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(29..1402)
DNA (1374bp) protein (458aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000373B596
Replication factor C large subunit
Tax=RBG_16_Euryarchaeota_67_27_curated
14_1009_13_30cm_scaffold_3163_2
unknown

Not on your lists

comp(1849..2226)
DNA (378bp) protein (126aa)

This feature has no annotations

14_1009_13_30cm_scaffold_3163_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(2596..3324)
DNA (729bp) protein (243aa)
integrase n=1 Tax=Streptococcus agalactiae RepID=UPI0002E76055
site-specific recombinase for integration and excision
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_13_30cm_scaffold_3163_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(3328..4188)
DNA (861bp) protein (287aa)
Site-specific recombinase, DNA invertase Pin n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VQ41_9EURY rbh
Site-specific recombinase for integration and excision
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_13_30cm_scaffold_3163_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(4487..5779)
DNA (1293bp) protein (431aa)
hmgA-1; hydroxymethylglutaryl-CoA reductase, degradative (EC:1.1.1.34 1.1.1.88)
Hydroxymethylglutaryl-CoA reductase, degradative n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I942_METCZ
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_13_30cm_scaffold_3163_6
unknown

Not on your lists

5805..6248
DNA (444bp) protein (148aa)

This feature has no annotations

14_1009_13_30cm_scaffold_3163_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

6777..8207
DNA (1431bp) protein (477aa)
Hydrophobic amino acid ABC transporter (HAAT) family, amino acid-binding protein n=1 Tax=Synechococcus sp. (strain JA-3-3Ab) RepID=Q2JRL6_SYNJA
hydrophobic amino acid ABC transporter amino acid-binding protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_13_30cm_scaffold_3163_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(8238..9017)
DNA (780bp) protein (260aa)
Branched-chain amino acid transport system ATP-binding protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SUB4_9BACT
livF; ABC transporter
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_13_30cm_scaffold_3163_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(9014..9778)
DNA (765bp) protein (255aa)
ABC transporter n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PC81_9EURY
branched-chain amino acid ABC transporter ATPase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_13_30cm_scaffold_3163_10
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(9788..11131)
DNA (1344bp) protein (448aa)
Inner-membrane translocator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJL2_9RHIZ
ABC-type branched-chain amino acid transport system, permease component
Tax=RBG_16_Euryarchaeota_68_13_curated
14_1009_13_30cm_scaffold_3163_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(11135..12295)
DNA (1161bp) protein (387aa)
High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5E1H0_9FIRM
amino acid/amide ABC transporter membrane protein 1, haat family
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_13_30cm_scaffold_3163_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

12388..13146
DNA (759bp) protein (253aa)
tRNA(1-methyladenosine) methyltransferase-like methyltransferase n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7T9N1_9EURY
tRNA(1-methyladenosine) methyltransferase-like methyltransferase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_13_30cm_scaffold_3163_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

13175..13828
DNA (654bp) protein (218aa)
Membrane protein, MarC family member n=1 Tax=uncultured archaeon RepID=D1JFE0_9ARCH
multiple antibiotic resistance protein MarC
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_13_30cm_scaffold_3163_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(13843..14133)
DNA (291bp) protein (97aa)
Hydrolase of the metallo-beta-lactamase superfamily n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CXT5_9ARCH
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Displaying 14 items

View Taxonomy