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14_1009_13_40cm_scaffold_7487

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_13_40cm_scaffold_7487_1
unknown

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comp(67..450)
DNA (384bp) protein (128aa)

This feature has no annotations

14_1009_13_40cm_scaffold_7487_2
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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comp(537..1877)
DNA (1341bp) protein (447aa)
glutamate dehydrogenase (EC:1.4.1.4) rbh
Glutamate dehydrogenase id=4349096 bin=GWF2_Lentisphaerae_57_35 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Tax=GWF2_Lentisphaerae_57_35_curated
14_1009_13_40cm_scaffold_7487_trna_1
unknown

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comp(1924..1995)
DNA (72bp)
transferRNA Val
14_1009_13_40cm_scaffold_7487_3

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2119..2571
DNA (453bp) protein (151aa)
Putative redox protein, regulator of disulfide bond formation n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DNF9_SINAD
Marine sediment metagenome DNA, contig: S01H1_L05764 {ECO:0000313|EMBL:GAF67559.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
redox protein, regulator of disulfide bond formation
14_1009_13_40cm_scaffold_7487_4
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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2517..4007
DNA (1491bp) protein (497aa)
glycine-tRNA synthetase subunit beta n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00037D1496
grs1; glycyl-tRNA synthetase (class II)
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
14_1009_13_40cm_scaffold_7487_5
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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4007..4399
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Hymenobacter aerophilus RepID=UPI00036E1C9C
MmcQ-like protein
MmcQ-like protein {ECO:0000313|EMBL:AIZ64039.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
14_1009_13_40cm_scaffold_7487_6
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(4335..5138)
DNA (804bp) protein (268aa)
murI; glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YFY7_THEYD
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
14_1009_13_40cm_scaffold_7487_7
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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5265..7916
DNA (2652bp) protein (884aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI0003660D23 rbh
valyl-tRNA synthetase
14_1009_13_40cm_scaffold_7487_8
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7867..8640)
DNA (774bp) protein (258aa)
Uncharacterized protein n=2 Tax=Lawsonia intracellularis RepID=M1GG23_LAWIN
Uncharacterized protein {ECO:0000313|EMBL:KEZ77878.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera hydrothermalis C41B8.;"
hypothetical protein
14_1009_13_40cm_scaffold_7487_9
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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8685..10670
DNA (1986bp) protein (662aa)
Carbon starvation protein CstA id=4490703 bin=GWF2_Lentisphaerae_52_8 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
carbon starvation protein CstA
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
14_1009_13_40cm_scaffold_7487_10
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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10754..11521
DNA (768bp) protein (256aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQ22_9BACT
RNA polymerase sigma-70 factor
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
14_1009_13_40cm_scaffold_7487_11
unknown

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comp(11577..11813)
DNA (237bp) protein (79aa)

This feature has no annotations

14_1009_13_40cm_scaffold_7487_12

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12207..15068
DNA (2862bp) protein (954aa)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48716.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
TPR repeat-containing serine/threonin protein kinase id=24431878 bin=RBG_19FT_COMBO_Aminicenantes_65_30 tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
serine/threonin protein kinase
Displaying 13 items

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