ggKbase home page

14_1009_13_40cm_scaffold_3694

Search features with annotation key words

Displaying 14 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_13_40cm_scaffold_3694_1
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

3..515
DNA (513bp) protein (171aa)
Undecaprenyl-diphosphatase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=UPPP_KORVE
UDP-diphosphatase
Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
14_1009_13_40cm_scaffold_3694_2
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

526..933
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00036076AE
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
14_1009_13_40cm_scaffold_3694_3
unknown

Not on your lists

997..1527
DNA (531bp) protein (177aa)

This feature has no annotations

14_1009_13_40cm_scaffold_3694_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

1710..2972
DNA (1263bp) protein (421aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Adenylosuccinate synthetase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CX05_9BACT
purA; adenylosuccinate synthase
14_1009_13_40cm_scaffold_3694_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

3020..3691
DNA (672bp) protein (224aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
UDP pyrophosphate synthase n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174583D
uppS; undecaprenyl diphosphate synthase
14_1009_13_40cm_scaffold_3694_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

3726..4469
DNA (744bp) protein (248aa)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAH9_9BACT
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:EDY16497.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
3-oxoacyl-(acyl-carrier-protein) reductase
14_1009_13_40cm_scaffold_3694_7
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4527..4970)
DNA (444bp) protein (148aa)
Putative thioesterase n=1 Tax=Variovorax paradoxus B4 RepID=T1XCA5_VARPD
Phosphotransferase {ECO:0000313|EMBL:KGI76729.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
putative thioesterase
14_1009_13_40cm_scaffold_3694_8
Thiorhodococcus sp. AK35, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5014..5934)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ24 RepID=UPI0003755233
Lysophospholipid acyltransferase {ECO:0000313|EMBL:EXJ16233.1}; TaxID=1249627 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus sp. AK35.;"
putative acyltransferase
14_1009_13_40cm_scaffold_3694_9
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5909..7147)
DNA (1239bp) protein (413aa)
Polyketide synthase n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1FUC5_9PSEU
Polyketide synthase {ECO:0000313|EMBL:EOD62968.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
methyltransferase domain protein
14_1009_13_40cm_scaffold_3694_10
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7144..7464)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034A972F
hydroxymyristoyl-ACP dehydratase
Tax=BJP_IG2102_Gammaproteobacteria_62_140
14_1009_13_40cm_scaffold_3694_11
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7557..8900)
DNA (1344bp) protein (448aa)
Putative uncharacterized protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LP43_SYNFM
hypothetical protein
Tax=RBG_16_Desulfobacca_60_12_curated
14_1009_13_40cm_scaffold_3694_12
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9046..9522
DNA (477bp) protein (159aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmospora.;" source="Desmospora sp. 8437.;"
msrA; peptide-methionine (S)-S-oxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Desmospora sp. 8437 RepID=F5SKU2_9BACL
14_1009_13_40cm_scaffold_3694_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

9710..10408
DNA (699bp) protein (233aa)
pgl; 6-phosphogluconolactonase (EC:3.1.1.31)
6-phosphogluconolactonase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAH7_9BACT
6-phosphogluconolactonase {ECO:0000313|EMBL:EDY16495.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
14_1009_13_40cm_scaffold_3694_14

Not on your lists

10578..11312
DNA (735bp) protein (245aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKS8_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48836.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
NAD-dependent epimerase/dehydratase
Displaying 14 items

View Taxonomy