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14_1009_16_30cm_scaffold_1652

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Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_16_30cm_scaffold_1652_1
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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1..603
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Rhodococcus sp. (strain RHA1) RepID=Q0RVU4_RHOSR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABH00592.1}; TaxID=101510 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus jostii (strain RHA1).;"
14_1009_16_30cm_scaffold_1652_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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628..1668
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036CD508
periplasmic binding protein/LacI transcriptional regulator
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:ABJ86876.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_1009_16_30cm_scaffold_1652_3
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(1682..2944)
DNA (1263bp) protein (421aa)
Tax=GWC2_Ignavibacteria_rel_36_12_curated
14_1009_16_30cm_scaffold_1652_4
unknown

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3022..3249
DNA (228bp) protein (76aa)

This feature has no annotations

14_1009_16_30cm_scaffold_1652_5
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

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3189..4187
DNA (999bp) protein (333aa)
Periplasmic solute binding protein id=4480276 bin=GWC2_Elusimicrobia_64_44 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
periplasmic solute binding protein
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
14_1009_16_30cm_scaffold_1652_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4192..5181
DNA (990bp) protein (330aa)
Luciferase family protein id=4478147 bin=GWC2_Methylomirabilis_70_24 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
luciferase-like protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_1009_16_30cm_scaffold_1652_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

5233..6324
DNA (1092bp) protein (364aa)
Putative uncharacterized protein id=2773068 bin=GWA2_Methylomirabilis_73_35 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dihydroorotate dehydrogenase
Tax=GWA2_Rokubacteria_73_35_curated
14_1009_16_30cm_scaffold_1652_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(6426..7196)
DNA (771bp) protein (257aa)
Putative uncharacterized protein id=3964600 bin=GWC2_Methylomirabilis_70_16 species=Nocardia farcinica genus=Nocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
14_1009_16_30cm_scaffold_1652_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

7262..8311
DNA (1050bp) protein (350aa)
Putative uncharacterized protein id=4165887 bin=GWF2_Methylomirabilis_70_14 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_1009_16_30cm_scaffold_1652_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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8308..9534
DNA (1227bp) protein (409aa)
threonine synthase; K01733 threonine synthase [EC:4.2.3.1] id=14626721 bin=bin7_NC10_sister species=Frankia sp. QA3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
threonine synthase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_1009_16_30cm_scaffold_1652_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9549..10139
DNA (591bp) protein (197aa)
Putative 3-methyladenine DNA glycosylase id=2773084 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA-3-methyladenine glycosylase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_1009_16_30cm_scaffold_1652_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10222..10980)
DNA (759bp) protein (253aa)
hypothetical protein id=2773093 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_1009_16_30cm_scaffold_1652_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11036..11746
DNA (711bp) protein (237aa)
tolQ protein; K03562 biopolymer transport protein TolQ id=14626725 bin=bin7_NC10_sister species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
tolQ; TolQ protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_1009_16_30cm_scaffold_1652_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11749..12177
DNA (429bp) protein (143aa)
tolR; protein TolR; K03560 biopolymer transport protein TolR id=14626726 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
tolR; protein TolR
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_1009_16_30cm_scaffold_1652_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12199..13023
DNA (825bp) protein (275aa)
TonB family protein id=4034141 bin=GWA2_Methylomirabilis_73_35 species=Synechococcus sp. genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative periplasmic protein TonB
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_1009_16_30cm_scaffold_1652_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13028..14359
DNA (1332bp) protein (444aa)
WD40 domain-containing protein; K03641 TolB protein id=14626728 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
biopolymer transport periplasmic beta-propeller repeat protein, TolB-related
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_1009_16_30cm_scaffold_1652_17
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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14422..15012
DNA (591bp) protein (197aa)
OmpA/MotB domain protein id=4034147 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidoglycan-binding outer membrane lipoprotein Pal, OmpA family
Tax=GWC2_Rokubacteria_70_16_curated
14_1009_16_30cm_scaffold_1652_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

15012..15914
DNA (903bp) protein (301aa)
Uncharacterized protein id=4034149 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TPR-domain containing protein
Tax=GWA2_Rokubacteria_73_35_curated
14_1009_16_30cm_scaffold_1652_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(15921..16409)
DNA (489bp) protein (163aa)
hypothetical protein id=4034151 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_1009_16_30cm_scaffold_1652_20
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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16415..17110
DNA (696bp) protein (232aa)
hypothetical protein; K07018 id=14626733 bin=bin7_NC10_sister species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
alpha/beta hydrolase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
14_1009_16_30cm_scaffold_1652_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(17276..17881)
DNA (606bp) protein (202aa)
hypothetical protein id=14626734 bin=bin7_NC10_sister species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
14_1009_16_30cm_scaffold_1652_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

17946..18611
DNA (666bp) protein (222aa)
Short-chain dehydrogenase/reductase SDR id=4034156 bin=GWA2_Methylomirabilis_73_35 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_1009_16_30cm_scaffold_1652_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(18612..19313)
DNA (702bp) protein (234aa)
Beta-lactamase-like id=4034158 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Beta-lactamase-like
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_1009_16_30cm_scaffold_1652_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19378..20178
DNA (801bp) protein (267aa)
hypothetical protein id=4034163 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_1009_16_30cm_scaffold_1652_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(20300..22066)
DNA (1767bp) protein (589aa)
Uncharacterized protein id=4034165 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_1009_16_30cm_scaffold_1652_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(22074..23597)
DNA (1524bp) protein (508aa)
Putative ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like id=4034167 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
gliding motility ABC transporter auxillary protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_1009_16_30cm_scaffold_1652_27
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(23594..24361)
DNA (768bp) protein (256aa)
ABC-type transport system involved in multi-copper enzyme maturation, permease component id=4830679 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
multi-copper enzyme maturation ABC transporter permease
Tax=GWA2_Rokubacteria_73_35_curated
14_1009_16_30cm_scaffold_1652_28
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(24358..25314)
DNA (957bp) protein (319aa)
ABC transporter id=14626741 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ABC transporter
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_1009_16_30cm_scaffold_1652_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(25333..25752)
DNA (420bp) protein (140aa)
Putative uncharacterized protein id=4830683 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
4-hydroxybenzoyl-CoA thioesterase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_1009_16_30cm_scaffold_1652_30
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(25779..26723)
DNA (945bp) protein (315aa)
26S proteasome subunit P45 family (EC:3.6.4.3)
Proteasome-activating nucleotidase id=4165965 bin=GWF2_Methylomirabilis_70_14 species=Thermosphaera aggregans genus=Thermosphaera taxon_order=Desulfurococcales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Displaying items 1-30 of 35 in total

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