ggKbase home page

14_1009_16_30cm_scaffold_8635

Search features with annotation key words

Displaying 27 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_16_30cm_scaffold_8635_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..359)
DNA (357bp) protein (119aa)
Serine/threonine protein kinase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NGP7_ROSCS
protein kinase
Protein kinase {ECO:0000313|EMBL:AHG88134.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_1009_16_30cm_scaffold_8635_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

487..1203
DNA (717bp) protein (239aa)
mtgA; monofunctional biosynthetic peptidoglycan transglycosylase; K03814 monofunctional biosynthetic peptidoglycan transglycosylase [EC:2.4.1.-] id=12555739 bin=CNBR_ACIDO species=unknown genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
mtgA; monofunctional biosynthetic peptidoglycan transglycosylase
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_1009_16_30cm_scaffold_8635_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1216..2322)
DNA (1107bp) protein (369aa)
DNA polymerase III subunit beta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3G7_GEMAT
DNA polymerase III, beta subunit
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_1009_16_30cm_scaffold_8635_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2562..3944)
DNA (1383bp) protein (461aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3G6_GEMAT
dnaA; chromosomal replication initiator protein DnaA
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_16_30cm_scaffold_8635_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


4069..4230
DNA (162bp) protein (54aa)
Ribosomal protein L34 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEQ0_GEMAT
rpmH; 50S ribosomal protein L34
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_16_30cm_scaffold_8635_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

4317..4568
DNA (252bp) protein (84aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Ribonuclease P protein component n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP9_GEMAT
Ribonuclease P protein component
14_1009_16_30cm_scaffold_8635_7
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

4565..4792
DNA (228bp) protein (76aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UEP1_CYAP2
hypothetical protein
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=497965 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7822).;"
14_1009_16_30cm_scaffold_8635_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

4802..6439
DNA (1638bp) protein (546aa)
Membrane protein insertase YidC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP7_GEMAT
Membrane protein oxaA
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_16_30cm_scaffold_8635_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

6449..7804
DNA (1356bp) protein (452aa)
tRNA modification GTPase MnmE n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP6_GEMAT
trmE; putative tRNA modification GTPase TrmE
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_16_30cm_scaffold_8635_10
CSP1_5_NC10, NC10, Bacteria

Not on your lists

7886..8428
DNA (543bp) protein (181aa)
hypothetical protein id=14429046 bin=bin3_NC10 species=Verrucomicrobium sp. 3C genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
14_1009_16_30cm_scaffold_8635_11

Not on your lists

comp(8441..9400)
DNA (960bp) protein (320aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BAC10-4 RepID=Q4JIU1_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AAY96670.1}; TaxID=333425 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-4.;"
40-residue YVTN family beta-propeller repeat protein
14_1009_16_30cm_scaffold_8635_12
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9423..10634)
DNA (1212bp) protein (404aa)
Blr6202 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89GZ3_BRADU
Uncharacterized protein {ECO:0000313|EMBL:BAR54241.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
hypothetical protein
14_1009_16_30cm_scaffold_8635_13
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(10658..11854)
DNA (1197bp) protein (399aa)
hypothetical protein id=14429050 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
extracellular solute-binding protein family 3
Tax=CSP1_5_NC10
14_1009_16_30cm_scaffold_8635_14
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11982..13742)
DNA (1761bp) protein (587aa)
methanol dehydrogenase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003635EFE
Methanol dehydrogenase {ECO:0000313|EMBL:ETW97015.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
putative methanol dehydrogenase MoxF
14_1009_16_30cm_scaffold_8635_15
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(13952..14941)
DNA (990bp) protein (330aa)
Putative beta-ribofuranosylaminobenzene 5'-phosphate synthase. Involved in methanopterin biosynthesis (Orf4) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJW3_9BACT
beta-ribofuranosylaminobenzene 5'-phosphate synthase. Involved in methanopterin biosynthesis (orf4)
Putative beta-ribofuranosylaminobenzene 5'-phosphate synthase. Involved in methanopterin biosynthesis (Orf4) {ECO:0000313|EMBL:CBE67546.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
14_1009_16_30cm_scaffold_8635_16
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(14938..15507)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJW4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67547.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
14_1009_16_30cm_scaffold_8635_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15504..16175)
DNA (672bp) protein (224aa)
Glutamine amidotransferase of anthranilate synthase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4Z3_SPHTD
glutamine amidotransferase of anthranilate synthase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
14_1009_16_30cm_scaffold_8635_18
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16172..17623)
DNA (1452bp) protein (484aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E6109E
para-aminobenzoate synthase subunit I rbh
Para-aminobenzoate synthase, subunit I {ECO:0000313|EMBL:ACK51328.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
14_1009_16_30cm_scaffold_8635_19
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(17620..19041)
DNA (1422bp) protein (474aa)
hypothetical protein id=14429014 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
14_1009_16_30cm_scaffold_8635_20
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(19038..19400)
DNA (363bp) protein (121aa)
4a-hydroxytetrahydrobiopterin dehydratase {ECO:0000256|SAAS:SAAS00118034}; EC=4.2.1.96 {ECO:0000256|SAAS:SAAS00118034};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Pterin-4a-carbinolamine dehydratase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DJV0_SINAD
pterin-4a-carbinolamine dehydratase
14_1009_16_30cm_scaffold_8635_21
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19422..20249)
DNA (828bp) protein (276aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C0X2_NITHN
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADE14529.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
14_1009_16_30cm_scaffold_8635_22
CSP1_5_NC10, NC10, Bacteria

Not on your lists

20303..21019
DNA (717bp) protein (239aa)
hypothetical protein id=14429017 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
14_1009_16_30cm_scaffold_8635_23
Anaerobaculum hydrogeniformans, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(20972..21595)
DNA (624bp) protein (208aa)
Amino acid kinase family n=1 Tax=Anaerobaculum hydrogeniformans ATCC BAA-1850 RepID=D3L1F5_9BACT
Amino acid kinase family {ECO:0000313|EMBL:EFD25575.1}; TaxID=592015 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaerobaculum hydrogeniformans ATCC BAA-1850.;"
kinase, aspartokinase/uridylate kinase
14_1009_16_30cm_scaffold_8635_24

Not on your lists

comp(21592..22620)
DNA (1029bp) protein (343aa)
Putative tetrahydromethanopterin biosynthesis protein n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIP6_9BACT
Putative tetrahydromethanopterin biosynthesis protein {ECO:0000313|EMBL:AAY89268.1}; TaxID=333372 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-10.;"
tetrahydromethanopterin biosynthesis protein
14_1009_16_30cm_scaffold_8635_25
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(22637..23140)
DNA (504bp) protein (168aa)
Putative 6-pyruvoyl tetrahydropterin synthase n=1 Tax=uncultured bacterium BAC10-4 RepID=Q4JIS7_9BACT
6-pyruvoyl-tetrahydropterin synthase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
14_1009_16_30cm_scaffold_8635_26

Not on your lists

comp(23127..24023)
DNA (897bp) protein (299aa)
Triphosphoribosyl-dephospho-CoA synthase {ECO:0000256|SAAS:SAAS00100821}; EC=2.4.2.52 {ECO:0000256|SAAS:SAAS00100821};; TaxID=333372 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-10.;"
Orf7 n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIN3_9BACT
hypothetical protein
14_1009_16_30cm_scaffold_8635_27

Not on your lists

comp(24020..24679)
DNA (660bp) protein (220aa)
Orf5 n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIN4_9BACT
Orf5 {ECO:0000313|EMBL:AAY89280.1}; TaxID=333372 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-10.;"
alpha-L-glutamate ligase
Displaying 27 items

View Taxonomy