ggKbase home page

14_1009_16_30cm_scaffold_28744

Search features with annotation key words

Displaying 20 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_16_30cm_scaffold_28744_1
unknown

Not on your lists

comp(2..199)
DNA (198bp) protein (66aa)

This feature has no annotations

14_1009_16_30cm_scaffold_28744_2
unknown

Not on your lists

comp(147..305)
DNA (159bp) protein (53aa)

This feature has no annotations

14_1009_16_30cm_scaffold_28744_3
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(575..1051)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI0003611F57
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
14_1009_16_30cm_scaffold_28744_4
R_OP11_Woesebacteria_39_13, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(1346..1486)
DNA (141bp) protein (47aa)
Tax=RIFCSPHIGHO2_02_FULL_OP11_Woesebacteria_39_13_curated
14_1009_16_30cm_scaffold_28744_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(1504..2109)
DNA (606bp) protein (202aa)
polyisoprenoid-binding protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI0002F8900A
Uncharacterized protein {ECO:0000313|EMBL:CDM65729.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
14_1009_16_30cm_scaffold_28744_6
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2151..2819)
DNA (669bp) protein (223aa)
adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC:2.6.1.62)
adenosylmethionine-8-amino-7-oxononanoate aminotransferase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EA730F
Adenosylmethionine-8-amino-7-oxononanoate transaminase {ECO:0000313|EMBL:EKS35993.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
14_1009_16_30cm_scaffold_28744_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(2842..3336)
DNA (495bp) protein (165aa)
adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC:2.6.1.62)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TZC0_9CYAN
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
14_1009_16_30cm_scaffold_28744_8
Synechococcus elongatus, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(3333..3815)
DNA (483bp) protein (161aa)
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {ECO:0000256|HAMAP-Rule:MF_00336}; TaxID=1140 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus elongatus (strain PCC 7942) (Anacystis nidulans R2).;"
ATP-dependent dethiobiotin synthetase BioD n=2 Tax=Synechococcus elongatus RepID=Q31SA7_SYNE7
bioD; dethiobiotin synthase
14_1009_16_30cm_scaffold_28744_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(4156..5286)
DNA (1131bp) protein (377aa)
kbl; 2-amino-3-ketobutyrate coenzyme A ligase (AKB ligase) (Glycine C-acetyltransferase) (EC:2.3.1.29)
8-amino-7-oxononanoate synthase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UQH8_9SPHN
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
14_1009_16_30cm_scaffold_28744_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(5279..6241)
DNA (963bp) protein (321aa)
biotin synthase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003646D6C rbh
biotin synthase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
14_1009_16_30cm_scaffold_28744_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

6299..6577
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B41125
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF43174.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
14_1009_16_30cm_scaffold_28744_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

6580..6861
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIX5_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF43175.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
14_1009_16_30cm_scaffold_28744_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7014..8030
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XXE2_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP36560.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
14_1009_16_30cm_scaffold_28744_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(8034..9281)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCZ5_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
14_1009_16_30cm_scaffold_28744_15
R_Planctomycetes_38_41, Planctomycetes, Bacteria

Not on your lists

comp(9303..9551)
DNA (249bp) protein (83aa)
Tax=RIFCSPHIGHO2_02_FULL_Planctomycetes_38_41_curated
14_1009_16_30cm_scaffold_28744_16
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(9585..10385)
DNA (801bp) protein (267aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9VVK4_9CYAN
multi-sensor hybrid histidine kinase
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:AFZ12133.1}; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum PCC 9333.;"
14_1009_16_30cm_scaffold_28744_17
R_Planctomycetes_50_16, Planctomycetes, Bacteria

Not on your lists

comp(10327..11274)
DNA (948bp) protein (316aa)
PAS domain S-box id=3350120 bin=GWC2_Nitrospirae_57_13 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
14_1009_16_30cm_scaffold_28744_18
unknown

Not on your lists

comp(11365..11550)
DNA (186bp) protein (62aa)

This feature has no annotations

14_1009_16_30cm_scaffold_28744_trna_1
unknown

Not on your lists

comp(12189..12261)
DNA (73bp)
transferRNA Val
14_1009_16_30cm_scaffold_28744_19
unknown

Not on your lists

12608..12736
DNA (129bp) protein (43aa)

This feature has no annotations

Displaying 20 items

View Taxonomy