ggKbase home page

14_1009_16_30cm_scaffold_25925

Search features with annotation key words

Displaying 21 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_16_30cm_scaffold_25925_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(3..164)
DNA (162bp) protein (54aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
14_1009_16_30cm_scaffold_25925_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

300..548
DNA (249bp) protein (83aa)
Transcriptional regulator, AsnC family n=1 Tax=mine drainage metagenome RepID=T0YGZ7_9ZZZZ
transcriptional regulator, AsnC family
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_16_30cm_scaffold_25925_3
unknown

Not on your lists

comp(567..884)
DNA (318bp) protein (106aa)

This feature has no annotations

14_1009_16_30cm_scaffold_25925_4
Metallosphaera sedula, Metallosphaera, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

1102..4074
DNA (2973bp) protein (991aa)
Extracellular solute-binding protein, family 5 n=1 Tax=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) RepID=A4YIT9_METS5
peptide ABC transporter substrate-binding protein
Extracellular solute-binding protein, family 5 {ECO:0000313|EMBL:ABP96341.1}; Flags: Precursor;; TaxID=399549 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Metallosphaera.;" source="Metallosphaera sedula (strain ATCC 51363 / DSM 5348).;"
14_1009_16_30cm_scaffold_25925_5
Thermoplasma volcanium, Thermoplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

4252..5364
DNA (1113bp) protein (371aa)
ABC transport system permease protein P1P2A1A2 n=1 Tax=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) RepID=Q978R0_THEVO
ABC-type peptide transport system, permease component
ABC transport system permease protein P1P2A1A2 {ECO:0000313|EMBL:BAB60497.1}; TaxID=273116 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Thermoplasmataceae; Thermoplasma.;" source="Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC; 15438 / GSS1).;"
14_1009_16_30cm_scaffold_25925_6
Metallosphaera cuprina, Metallosphaera, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

5615..6286
DNA (672bp) protein (224aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) RepID=A4YIU1_METS5
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:AEB94212.1}; TaxID=1006006 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Metallosphaera.;" source="Metallosphaera cuprina (strain Ar-4).;"
14_1009_16_30cm_scaffold_25925_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

6290..8092
DNA (1803bp) protein (601aa)
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L5W3_KORCO
dipeptide/oligopeptide/nickel ABC transporter ATPase
Tax=RBG_16_Euryarchaeota_68_12_curated
14_1009_16_30cm_scaffold_25925_8
Thermoplasma volcanium, Thermoplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

8076..9440
DNA (1365bp) protein (455aa)
ABC transport system ATP-binding protein P1P2A1A2 n=1 Tax=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) RepID=Q978R3_THEVO
ABC-type peptide transporter, ATPase component
ABC transport system ATP-binding protein P1P2A1A2 {ECO:0000313|EMBL:BAB60494.1}; TaxID=273116 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Thermoplasmataceae; Thermoplasma.;" source="Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC; 15438 / GSS1).;"
14_1009_16_30cm_scaffold_25925_9
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(9460..9861)
DNA (402bp) protein (134aa)
endoribonuclease L-PSP n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029A1403
endoribonuclease L-PSP
Tax=RBG_16_Euryarchaeota_67_27_curated
14_1009_16_30cm_scaffold_25925_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

10062..11810
DNA (1749bp) protein (583aa)
pyruvate ferredoxin oxidoreductase, alpha chain (EC:1.2.7.1)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-N23 RepID=UPI000374FA77
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_16_30cm_scaffold_25925_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

11807..12691
DNA (885bp) protein (295aa)
2-oxoacid:acceptor oxidoreductase subunit beta, pyruvate/2-ketoisovalerate family (EC:1.2.7.3)
Pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit n=2 Tax=mine drainage metagenome RepID=T0ZU80_9ZZZZ
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_16_30cm_scaffold_25925_12
unknown

Not on your lists

12688..13353
DNA (666bp) protein (222aa)

This feature has no annotations

14_1009_16_30cm_scaffold_25925_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(13581..13967)
DNA (387bp) protein (129aa)
Putative uncharacterized protein id=1820917 bin=GWD2_Deltaproteobacteria_55_8 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_16_30cm_scaffold_25925_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(14009..14257)
DNA (249bp) protein (83aa)
SirA family protein id=3198593 bin=GWC2_Nitrospirae_57_13 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_16_30cm_scaffold_25925_15
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(14281..14661)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-N13 RepID=UPI0003717F1F
DsrE family protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_16_30cm_scaffold_25925_16
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(14732..15571)
DNA (840bp) protein (280aa)
Translation initiation factor eIF-2B subunit 2-like (EIF-2BII) n=1 Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=C5A7F8_THEGJ
translation initiation factor IF-2B subunit alpha
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_16_30cm_scaffold_25925_17
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(15552..16496)
DNA (945bp) protein (315aa)
Beta-lactamase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XGS5_9EURY
metallo-beta-lactamase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_16_30cm_scaffold_25925_trna_1
unknown

Not on your lists

16550..16633
DNA (84bp)
transferRNA Leu
14_1009_16_30cm_scaffold_25925_18
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(16652..17146)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003666B11
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
14_1009_16_30cm_scaffold_25925_19
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(17143..19491)
DNA (2349bp) protein (783aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003643752
ski2-like helicase
Tax=RBG_16_Euryarchaeota_67_27_curated
14_1009_16_30cm_scaffold_25925_20
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

19571..20434
DNA (864bp) protein (288aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
Displaying 21 items

View Taxonomy