ggKbase home page

14_1009_16_40cm_scaffold_10347

Search features with annotation key words

Displaying 17 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_16_40cm_scaffold_10347_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..500)
DNA (498bp) protein (166aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA35_GEMAT
3-oxoacyl-[acyl-carrier-protein] synthase 2
14_1009_16_40cm_scaffold_10347_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(514..1077)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA34_GEMAT
Polyketide cyclase/dehydrase
Polyketide cyclase/dehydrase {ECO:0000313|EMBL:AHG91721.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_1009_16_40cm_scaffold_10347_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1077..1775)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA33_GEMAT
Methyltransferase type 11
Methyltransferase type 11 {ECO:0000313|EMBL:AHG91720.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_1009_16_40cm_scaffold_10347_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1780..2196)
DNA (417bp) protein (139aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA32_GEMAT
flavin reductase domain protein FMN-binding protein
Flavin reductase domain protein FMN-binding protein {ECO:0000313|EMBL:AHG91719.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_1009_16_40cm_scaffold_10347_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2253..3410)
DNA (1158bp) protein (386aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA31_GEMAT
monooxygenase FAD-binding protein
Monooxygenase FAD-binding protein {ECO:0000313|EMBL:AHG91718.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_1009_16_40cm_scaffold_10347_6
Geobacter sp. M21, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3505..4956)
DNA (1452bp) protein (484aa)
Radical SAM domain protein n=1 Tax=Geobacter sp. (strain M21) RepID=C6E443_GEOSM rbh
radical SAM protein rbh
Radical SAM domain protein {ECO:0000313|EMBL:ACT19262.1}; TaxID=443144 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M21).;"
14_1009_16_40cm_scaffold_10347_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4985..5755)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B351_HERA2
protein of unknown function DUF92 transmembrane
Uncharacterized protein {ECO:0000313|EMBL:AHG91717.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_1009_16_40cm_scaffold_10347_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5878..6510
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA29_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91716.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_1009_16_40cm_scaffold_10347_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6520..7698
DNA (1179bp) protein (393aa)
Putative M24 family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA28_GEMAT
peptidase M24
Peptidase M24 {ECO:0000313|EMBL:AHG91715.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_1009_16_40cm_scaffold_10347_10
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7695..8699)
DNA (1005bp) protein (335aa)
Polysaccharide deacetylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W708_9GAMM
Glycosyltransferase {ECO:0000313|EMBL:KHK03531.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
putative glycosyl transferase/polysaccharide deacetylase
14_1009_16_40cm_scaffold_10347_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

8731..10482
DNA (1752bp) protein (584aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5S5_GEMAT rbh
Amidohydrolase 3
Amidohydrolase 3 {ECO:0000313|EMBL:AHG89988.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_1009_16_40cm_scaffold_10347_12
unknown

Not on your lists

comp(10317..10730)
DNA (414bp) protein (138aa)

This feature has no annotations

14_1009_16_40cm_scaffold_10347_13
unknown

Not on your lists

comp(10783..11340)
DNA (558bp) protein (186aa)

This feature has no annotations

14_1009_16_40cm_scaffold_10347_14
unknown

Not on your lists

comp(11337..11471)
DNA (135bp) protein (45aa)

This feature has no annotations

14_1009_16_40cm_scaffold_10347_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11511..13343)
DNA (1833bp) protein (611aa)
Putative Lipid A export ATP-binding/permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA26_GEMAT rbh
ABC transporter transmembrane region
ABC transporter transmembrane region {ECO:0000313|EMBL:AHG91711.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_1009_16_40cm_scaffold_10347_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13340..14215)
DNA (876bp) protein (292aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Protoheme IX farnesyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA25_GEMAT rbh
Protoheme IX farnesyltransferase
14_1009_16_40cm_scaffold_10347_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14216..14923)
DNA (708bp) protein (236aa)
Cytochrome oxidase assembly family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA24_GEMAT
cytochrome oxidase assembly
Cytochrome oxidase assembly {ECO:0000313|EMBL:AHG91708.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 17 items

View Taxonomy