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14_1009_16_40cm_scaffold_3118

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Displaying items 1-30 of 32 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_16_40cm_scaffold_3118_1
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

3..2069
DNA (2067bp) protein (689aa)
Penicillin-binding protein 1A n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIR9_KORVE
penicillin-binding protein 1A
Tax=RBG_16_Acidobacteria_70_10_curated
14_1009_16_40cm_scaffold_3118_2
unknown

Not on your lists

comp(1919..2215)
DNA (297bp) protein (99aa)

This feature has no annotations

14_1009_16_40cm_scaffold_3118_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

3723..4364
DNA (642bp) protein (214aa)
Putative Hybrid sensor histidine kinase id=4475560 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
PAS sensor protein
Tax=GWC2_Rokubacteria_70_16_curated
14_1009_16_40cm_scaffold_3118_4
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(4410..6008)
DNA (1599bp) protein (533aa)
Alkaline phosphatase (EC:3.1.3.1)
sna:Snas_4283 metallophosphoesterase id=1246277 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Tax=RBG_16_Chloroflexi_63_12_curated
14_1009_16_40cm_scaffold_3118_5
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(6121..6996)
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037E3563
WD40-like beta Propeller containing protein
Tax=RBG_16_Acidobacteria_70_10_curated
14_1009_16_40cm_scaffold_3118_6
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(7044..8063)
DNA (1020bp) protein (340aa)
peptide chain release factor 2; K02836 peptide chain release factor 2 id=12555965 bin=CNBR_ACIDO species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
peptide chain release factor 2 (bRF-2)
Tax=RBG_16_Acidobacteria_70_10_curated
14_1009_16_40cm_scaffold_3118_7
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(8354..9883)
DNA (1530bp) protein (510aa)
Apolipoprotein N-acyltransferase n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EGF7_GEOBB
lnt-1; apolipoprotein N-acyltransferase
Tax=RBG_16_Acidobacteria_70_10_curated
14_1009_16_40cm_scaffold_3118_8
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9880..10677)
DNA (798bp) protein (266aa)
Lipoyl synthase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B6D2_HERA2
lipoyl synthase
Tax=RBG_13_Deltaproteobacteria_61_14_curated
14_1009_16_40cm_scaffold_3118_9
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(10824..11564)
DNA (741bp) protein (247aa)
Sporulation domain-containing protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WV95_PSEUU
sporulation domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
14_1009_16_40cm_scaffold_3118_10
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(11623..12771)
DNA (1149bp) protein (383aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium 293 RepID=E3T607_9BACT
Zn finger domain-containing DnaJ-class molecular chaperone
Tax=RBG_16_Acidobacteria_70_10_curated
14_1009_16_40cm_scaffold_3118_11
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(12778..13518)
DNA (741bp) protein (247aa)
membrane protein id=8267436 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
membrane protease subunit, stomatin/prohibitin
Tax=RBG_16_Acidobacteria_70_10_curated
14_1009_16_40cm_scaffold_3118_12
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(13518..14810)
DNA (1293bp) protein (431aa)
nfeD; NfeD-like membrane-bound serine protease; K07403 membrane-bound serine protease (ClpP class) id=16956438 bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
serine protease
Tax=RBG_16_Acidobacteria_70_10_curated
14_1009_16_40cm_scaffold_3118_13
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

14840..15163
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QKI2_9ZZZZ
Sec-independent protein secretion pathway component
Tax=RBG_16_Acidobacteria_70_10_curated
14_1009_16_40cm_scaffold_3118_14
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

15180..15950
DNA (771bp) protein (257aa)
Sec-independent protein translocase protein TatC n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=TATC_KORVE
Sec-independent protein translocase TatC
Tax=RBG_16_Acidobacteria_70_10_curated
14_1009_16_40cm_scaffold_3118_15
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(15955..16461)
DNA (507bp) protein (169aa)
hypothetical protein; K09005 hypothetical protein id=16802451 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
14_1009_16_40cm_scaffold_3118_16
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(16470..17738)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Leptotrichia wadei F0279 RepID=U2PFB0_9FUSO
Tax=RBG_13_Planctomycetes_50_24_curated
14_1009_16_40cm_scaffold_3118_17
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17735..19570)
DNA (1836bp) protein (612aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037F214D
Uncharacterized protein {ECO:0000313|EMBL:AKF05855.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
membrane protein
14_1009_16_40cm_scaffold_3118_18
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19919..20626)
DNA (708bp) protein (236aa)
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XTQ1_9BACT
protein-L-isoaspartate O-methyltransferase
Tax=RBG_13_Deltaproteobacteria_61_14_curated
14_1009_16_40cm_scaffold_3118_19
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists


comp(20639..22090)
DNA (1452bp) protein (484aa)
Proline--tRNA ligase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GH56_9FIRM
prolyl-tRNA synthetase
Tax=RBG_16_Acidobacteria_70_10_curated
14_1009_16_40cm_scaffold_3118_20
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(22093..23112)
DNA (1020bp) protein (340aa)
Putative transport protein id=4661724 bin=GWA2_Methylomirabilis_73_35 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative transport protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
14_1009_16_40cm_scaffold_3118_21
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(23132..24328)
DNA (1197bp) protein (399aa)
Sodium/calcium exchanger membrane region n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CF48_THET1 id=5225356 bin=16ft_combo_ws3_JS1 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
sodium/calcium exchanger membrane region
Tax=RBG_16_Acidobacteria_70_10_curated
14_1009_16_40cm_scaffold_3118_22
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(24322..25890)
DNA (1569bp) protein (523aa)
nadB; L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
L-aspartate oxidase n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F549_ACIC5
14_1009_16_40cm_scaffold_3118_23
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

25951..28017
DNA (2067bp) protein (689aa)
Putative uncharacterized protein id=3707948 bin=GWF2_Lentisphaerae_49_21 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good + rbh
hypothetical protein
Tax=GWF2_Lentisphaerae_49_21_curated
14_1009_16_40cm_scaffold_3118_24
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

28085..28546
DNA (462bp) protein (154aa)
Tax=RBG_16_Acidobacteria_70_10_curated
14_1009_16_40cm_scaffold_3118_25
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

28690..29724
DNA (1035bp) protein (345aa)
3-dehydroquinate synthase (EC:4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4] id=12555531 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
Tax=RBG_16_Acidobacteria_70_10_curated
14_1009_16_40cm_scaffold_3118_26
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(29777..30709)
DNA (933bp) protein (311aa)
Ornithine carbamoyltransferase n=1 Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=C5A5Z2_THEGJ
ornithine carbamoyltransferase
Tax=RBG_16_Acidobacteria_70_10_curated
14_1009_16_40cm_scaffold_3118_27
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

30790..31401
DNA (612bp) protein (204aa)
4-diphosphocytidyl-2C-methyl-D-erythritolsynthas E id=2013955 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
4-diphosphocytidyl-2C-methyl-D-erythritol synthase
Tax=RBG_16_Acidobacteria_70_10_curated
14_1009_16_40cm_scaffold_3118_28
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

31417..33243
DNA (1827bp) protein (609aa)
GTP-binding protein TypA n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QA5_SOLUE
GTP-binding protein TypA
GTP-binding protein TypA {ECO:0000313|EMBL:ABJ88165.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_1009_16_40cm_scaffold_3118_29
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(33240..34610)
DNA (1371bp) protein (457aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRB0_KORVE
Fis family transcriptional regulator
Tax=RBG_16_Acidobacteria_70_10_curated
14_1009_16_40cm_scaffold_3118_30
unknown

Not on your lists

comp(34649..35236)
DNA (588bp) protein (196aa)

This feature has no annotations

Displaying items 1-30 of 32 in total

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