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14_1009_16_40cm_scaffold_3216

Search features with annotation key words

Displaying items 1-30 of 56 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_16_40cm_scaffold_3216_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

2..1684
DNA (1683bp) protein (561aa)
alpha-2-macroglobulin-like protein2; K06894 id=12555062 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
yfhM2; large extracellular alpha-helical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
14_1009_16_40cm_scaffold_3216_2
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

1681..4020
DNA (2340bp) protein (780aa)
hypothetical protein id=12555061 bin=CNBR_ACIDO species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
pbp2; penicillin-binding protein rbh
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
14_1009_16_40cm_scaffold_3216_3
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

comp(4184..7015)
DNA (2832bp) protein (944aa)
hypothetical protein id=14430002 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin3_NC10 organism_group=NC10
type I phosphodiesterase/nucleotide pyrophosphatase
Tax=CG_Arma_02
14_1009_16_40cm_scaffold_3216_4
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7019..7642)
DNA (624bp) protein (208aa)
General secretion pathway protein C n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DGK1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHE99800.1}; TaxID=713587 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio thiocyanoxidans ARh 4.;"
14_1009_16_40cm_scaffold_3216_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

7755..9749
DNA (1995bp) protein (665aa)
protein serine/threonine phosphatase id=12556900 bin=CNBR_ACIDO species=Terriglobus saanensis genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
HAMP domain-containing protein,cache domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
14_1009_16_40cm_scaffold_3216_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

9746..10453
DNA (708bp) protein (236aa)
rnc; ribonuclease III (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3] id=12556901 bin=CNBR_ACIDO species=unknown genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ribonuclease III (EC:3.1.26.3)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
14_1009_16_40cm_scaffold_3216_7
unknown

Not on your lists

comp(10455..10985)
DNA (531bp) protein (177aa)

This feature has no annotations

14_1009_16_40cm_scaffold_3216_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(11011..12090)
DNA (1080bp) protein (360aa)
tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDQ3_CHLTF
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
14_1009_16_40cm_scaffold_3216_9
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(12107..13537)
DNA (1431bp) protein (477aa)
hypothetical protein id=14632030 bin=bin9_gal15 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
14_1009_16_40cm_scaffold_3216_10
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(13534..14151)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Actinomadura atramentaria RepID=UPI00035C2763
FHA domain containing protein
Tax=RBG_16_Acidobacteria_70_10_curated
14_1009_16_40cm_scaffold_3216_11
Solea senegalensis, Solea, Pleuronectiformes, Neopterygii, Chordata, Metazoa

Not on your lists

14240..14530
DNA (291bp) protein (97aa)
Calsequestrin n=1 Tax=Solea senegalensis RepID=B3IYI3_SOLSE
Calsequestrin {ECO:0000256|RuleBase:RU000648}; TaxID=28829 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea.;" source="Solea senegalensis (Senegalese sole).;"
ATPase
14_1009_16_40cm_scaffold_3216_12
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

14527..15387
DNA (861bp) protein (287aa)
Lipoyl synthase id=4099734 bin=GWA2_Ignavibacteria_55_11 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
lipoyl synthase
Tax=RBG_16_Acidobacteria_70_10_curated
14_1009_16_40cm_scaffold_3216_13
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(15384..16544)
DNA (1161bp) protein (387aa)
iscS; cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase id=2846052 bin=GWC2_Deltaproteobacteria_56_8 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
Tax=RBG_16_Acidobacteria_70_10_curated
14_1009_16_40cm_scaffold_3216_14
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

16625..17443
DNA (819bp) protein (273aa)
Putative uncharacterized protein id=4092238 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
14_1009_16_40cm_scaffold_3216_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

17503..18774
DNA (1272bp) protein (424aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:CDM64247.1}; EC=2.3.1.9 {ECO:0000313|EMBL:CDM64247.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Acetyl-CoA acetyltransferase id=8266200 bin=CD_OP8_4m species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
atoB; acetyl-CoA acetyltransferase
14_1009_16_40cm_scaffold_3216_16
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

18786..19607
DNA (822bp) protein (274aa)
Cyclohexa-1,5-diene-1-carbonyl-CoA hydratase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IS86_KORVE
enoyl-CoA hydratase
Tax=RBG_16_Acidobacteria_70_10_curated
14_1009_16_40cm_scaffold_3216_17
unknown

Not on your lists

19607..19882
DNA (276bp) protein (92aa)

This feature has no annotations

14_1009_16_40cm_scaffold_3216_18
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

19885..21087
DNA (1203bp) protein (401aa)
acyl-CoA dehydrogenase domain-containing protein id=24458148 bin=RBG_19FT_COMBO_GAL15_69_19 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
acyl-CoA dehydrogenase domain protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
14_1009_16_40cm_scaffold_3216_19
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

21193..22158
DNA (966bp) protein (322aa)
glpX; fructose 1,6-bisphosphatase II (EC:3.1.3.11); K02446 fructose-1,6-bisphosphatase II [EC:3.1.3.11] id=14627513 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
glpX; fructose 1,6-bisphosphatase II (EC:3.1.3.11)
Tax=RBG_16_Acidobacteria_70_10_curated
14_1009_16_40cm_scaffold_3216_20
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

22498..23565
DNA (1068bp) protein (356aa)
Type IV pilus biogenesis protein PilM n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D0B0_MYXXD
pilM; type IV pilus biogenesis protein PilM
Tax=RBG_16_Acidobacteria_70_10_curated
14_1009_16_40cm_scaffold_3216_21
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

23562..24188
DNA (627bp) protein (209aa)
hypothetical protein id=8266696 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
14_1009_16_40cm_scaffold_3216_22
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

24215..24775
DNA (561bp) protein (187aa)
fimbrial assembly protein PilO; K02664 type IV pilus assembly protein PilO id=24513872 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
fimbrial assembly protein PilO
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
14_1009_16_40cm_scaffold_3216_23
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

24775..25284
DNA (510bp) protein (170aa)
Type IV pilus assembly protein PilP n=1 Tax=uncultured prokaryote RepID=H5SKW4_9ZZZZ
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
14_1009_16_40cm_scaffold_3216_24
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

25281..27659
DNA (2379bp) protein (793aa)
type II and III secretion system protein; K02666 type IV pilus assembly protein PilQ id=16781335 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM rbh
type II and III secretion system protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
14_1009_16_40cm_scaffold_3216_25
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

27724..28302
DNA (579bp) protein (193aa)
hypothetical protein id=24412657 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
14_1009_16_40cm_scaffold_3216_26
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

28350..29174
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Psychromonas ossibalaenae RepID=UPI000382E009
cytochrome C
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
14_1009_16_40cm_scaffold_3216_27
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

29261..30706
DNA (1446bp) protein (482aa)
Uncharacterized protein id=3932797 bin=GWC2_Nitrospirae-rel_56_14 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
Tax=GWC2_Nitrospirae_56_14_curated
14_1009_16_40cm_scaffold_3216_28
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

30709..31071
DNA (363bp) protein (121aa)
Putative distant relative of homeotic protein bithoraxoid n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIR2_CHLTF
hypothetical protein
Putative distant relative of homeotic protein bithoraxoid {ECO:0000313|EMBL:AEP12280.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
14_1009_16_40cm_scaffold_3216_29
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

31488..31988
DNA (501bp) protein (167aa)
Biotin carboxyl carrier protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILG1_KORVE
biotin carboxyl carrier protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
14_1009_16_40cm_scaffold_3216_30
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

32134..33498
DNA (1365bp) protein (455aa)
accC; acetyl-CoA carboxylase, biotin carboxylase (EC:6.4.1.2); K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] id=12555291 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
accC; acetyl-Coa carboxylase, biotin carboxylase (EC:6.4.1.2 6.3.4.14)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Displaying items 1-30 of 56 in total

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