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14_1009_16_40cm_scaffold_8475

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_16_40cm_scaffold_8475_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(2..196)
DNA (195bp) protein (65aa)
FAD linked oxidase domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCW3_9BACT
FAD linked oxidase domain protein {ECO:0000313|EMBL:EEF62309.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
FAD/FMN-dependent dehydrogenase
14_1009_16_40cm_scaffold_8475_2
Coraliomargarita akajimensis, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(319..1359)
DNA (1041bp) protein (347aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=583355 species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae; Coraliomargarita.;" source="Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193; / KCTC 12865).;"
DNA polymerase IV n=1 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865) RepID=D5EJC6_CORAD
DNA-directed DNA polymerase
14_1009_16_40cm_scaffold_8475_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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1479..3362
DNA (1884bp) protein (628aa)
Cytochrome-c oxidase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XST8_9BACT
cyoB; Heme/copper-type cytochrome oxidase, subunit 1
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
14_1009_16_40cm_scaffold_8475_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

3388..4245
DNA (858bp) protein (286aa)
heme transporter CcmC n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI000377BD7D
Cytochrome c oxidase subunit III {ECO:0000313|EMBL:EEF57106.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
cyoC; Heme/copper-type cytochrome oxidase, subunit 3
14_1009_16_40cm_scaffold_8475_5
R_WOR_2_48_11, WOR-2, Bacteria

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4249..4593
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI0003678F6A
caa(3)-type oxidase subunit IV
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
14_1009_16_40cm_scaffold_8475_6
unknown

Not on your lists

4594..4803
DNA (210bp) protein (70aa)

This feature has no annotations

14_1009_16_40cm_scaffold_8475_7
unknown

Not on your lists

4800..5057
DNA (258bp) protein (86aa)

This feature has no annotations

14_1009_16_40cm_scaffold_8475_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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5050..5904
DNA (855bp) protein (285aa)
Cytochrome c oxidase subunit II n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZZ7_9BACT
Cytochrome c oxidase subunit II {ECO:0000313|EMBL:EDY20311.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
cyoA; Heme/copper-type cytochrome oxidase, subunit 2
14_1009_16_40cm_scaffold_8475_9
unknown

Not on your lists

comp(6242..6388)
DNA (147bp) protein (49aa)

This feature has no annotations

14_1009_16_40cm_scaffold_8475_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

6649..7602
DNA (954bp) protein (318aa)
Cytochrome oxidase assembly n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XST6_9BACT
Cytochrome oxidase assembly {ECO:0000313|EMBL:EEF57103.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ctaA; Heme A synthase, cytochrome oxidase biogenesis protein CtaA
14_1009_16_40cm_scaffold_8475_11
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

7599..8498
DNA (900bp) protein (300aa)
Protoheme IX farnesyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XST7_9BACT
protoheme IX farnesyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
14_1009_16_40cm_scaffold_8475_12
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8506..9219
DNA (714bp) protein (238aa)
SCO1/SenC family protein id=1947439 bin=GWD2_Deltaproteobacteria_55_8 species=Myxococcus xanthus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
lipoprotein
Tax=GWD2_Deltaproteobacteria_55_8_curated
14_1009_16_40cm_scaffold_8475_13
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9312..10208)
DNA (897bp) protein (299aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=483547 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter subterraneus.;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Geobacter sp. (strain M18) RepID=E8WMH1_GEOS8
glucose-1-phosphate thymidylyltransferase
14_1009_16_40cm_scaffold_8475_14

Not on your lists

comp(10205..12076)
DNA (1872bp) protein (624aa)
Glycosyl transferase, group 1 n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174595C rbh
Glycosyl transferases group 1 {ECO:0000313|EMBL:AIA11190.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
group 1 glycosyl transferase
14_1009_16_40cm_scaffold_8475_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(12184..12540)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6N6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY17837.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
14_1009_16_40cm_scaffold_8475_16
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12630..13706
DNA (1077bp) protein (359aa)
Glycosyl transferase family 2 n=6 Tax=Clostridium thermocellum RepID=A3DK13_CLOTH
glycosyl transferase family protein
Glycosyl transferase family 2 {ECO:0000313|EMBL:ABN54292.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
14_1009_16_40cm_scaffold_8475_17
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

13759..14514
DNA (756bp) protein (252aa)
Methyltransferase family protein n=1 Tax=alpha proteobacterium HIMB5 RepID=J9YWT9_9PROT
methyltransferase family protein
Tax=RBG_13_Planctomycetes_60_9_curated
14_1009_16_40cm_scaffold_8475_18
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

14536..15306
DNA (771bp) protein (257aa)
cell wall biosynthesis glycosyltransferase (EC:2.4.1.83)
Putative polyprenol phosphate mannosyl transferase 1 (Ppm1) n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZS78_9PLAN
Putative polyprenol phosphate mannosyl transferase 1 (Ppm1) {ECO:0000313|EMBL:EAQ80536.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
14_1009_16_40cm_scaffold_8475_19
Pantoea sp. At-9b, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15494..16714)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Pantoea sp. (strain At-9b) RepID=E6WFM2_PANSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU70296.1}; TaxID=592316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. (strain At-9b).;"
Displaying 19 items

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