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15con1.8.AGTCAA_scaffold_4

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Displaying items 1-30 of 87 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
15con1.8.AGTCAA_scaffold_4_trna_2
unknown

Not on your lists

comp(41881..41953)
DNA (73bp)
transferRNA Thr
15con1.8.AGTCAA_scaffold_4_1
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(1..945)
DNA (945bp) protein (315aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
15con1.8.AGTCAA_scaffold_4_trna_1
unknown

Not on your lists

57399..57471
DNA (73bp)
transferRNA Cys
15con1.8.AGTCAA_scaffold_4_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(966..3074)
DNA (2109bp) protein (703aa)
putative beta-ketoadipyl CoA thiolase (EC:2.3.1.-) id=1245926 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi rbh
putative beta-ketoadipyl CoA thiolase (EC:2.3.1.-) rbh
Tax=RBG_16_Euryarchaeota_68_12_curated
15con1.8.AGTCAA_scaffold_4_3
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

3178..4248
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003751620 rbh
hypothetical protein
Tax=RBG_16_Euryarchaeota_67_27_curated
15con1.8.AGTCAA_scaffold_4_4
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(4100..5230)
DNA (1131bp) protein (377aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
15con1.8.AGTCAA_scaffold_4_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(5227..6993)
DNA (1767bp) protein (589aa)
yqhH; ATP-dependent helicase YqhH (EC:3.6.4.-)
ATP-dependent helicase YqhH id=2610197 bin=GWC2_Methylomirabilis_70_16 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
15con1.8.AGTCAA_scaffold_4_6
Thermofilum pendens, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(7074..8474)
DNA (1401bp) protein (467aa)
Major facilitator superfamily MFS_1 n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1S0Q6_THEPD
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABL79036.1}; Flags: Precursor;; TaxID=368408 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum pendens (strain Hrk 5).;"
15con1.8.AGTCAA_scaffold_4_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(8648..9073)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000360423D
NusA protein-like, archaeal
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
15con1.8.AGTCAA_scaffold_4_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(9081..9347)
DNA (267bp) protein (89aa)
50S ribosomal protein L30e n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KNF2_ARCVS
50S ribosomal protein L30
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
15con1.8.AGTCAA_scaffold_4_9
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(9353..10933)
DNA (1581bp) protein (527aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000364B1D3
DNA-directed RNA polymerase subunit A''
Tax=RBG_16_Euryarchaeota_68_13_curated
15con1.8.AGTCAA_scaffold_4_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(10936..13728)
DNA (2793bp) protein (931aa)
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036D6AD8
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
15con1.8.AGTCAA_scaffold_4_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(13725..17321)
DNA (3597bp) protein (1199aa)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036EB389
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
15con1.8.AGTCAA_scaffold_4_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(17325..17726)
DNA (402bp) protein (134aa)
DNA-directed RNA polymerase subunit H (EC:2.7.7.6)
DNA-directed RNA polymerase subunit H n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0LA86_9EURY
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
15con1.8.AGTCAA_scaffold_4_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

18159..18419
DNA (261bp) protein (87aa)
Elongation factor 1-beta n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HKW0_METFS
translation elongation factor aEF-1 beta
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
15con1.8.AGTCAA_scaffold_4_14
Paenibacillus sabinae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18552..19361
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BN88_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHV98897.1}; TaxID=1268072 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sabinae T27.;"
15con1.8.AGTCAA_scaffold_4_15
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(19358..21664)
DNA (2307bp) protein (769aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037B5425
amino acid permease
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
15con1.8.AGTCAA_scaffold_4_16
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(21748..22299)
DNA (552bp) protein (184aa)
Putative Ras family protein n=1 Tax=uncultured marine microorganism HF4000_APKG10F13 RepID=B3TBS9_9ZZZZ
small GTP-binding protein
Tax=RBG_16_Euryarchaeota_67_27_curated
15con1.8.AGTCAA_scaffold_4_17
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

22450..23367
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037182C1
Tax=RBG_16_Euryarchaeota_67_27_curated
15con1.8.AGTCAA_scaffold_4_18
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(23466..24134)
DNA (669bp) protein (223aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CIT5_THET1
bifunctional deaminase-reductase domain-containing protein
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:ACZ43655.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
15con1.8.AGTCAA_scaffold_4_19
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(24527..28885)
DNA (4359bp) protein (1453aa)
Conserved repeat protein n=2 Tax=Paenibacillus RepID=F5LK16_9BACL
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
15con1.8.AGTCAA_scaffold_4_20
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(28970..29665)
DNA (696bp) protein (232aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
15con1.8.AGTCAA_scaffold_4_21
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(29667..30533)
DNA (867bp) protein (289aa)
RecA-superfamily ATPase possibly involved in signal transduction n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HI08_ACIS0
RecA-superfamily ATPase possibly involved in signal transduction
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
15con1.8.AGTCAA_scaffold_4_22
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(30601..30951)
DNA (351bp) protein (117aa)
Thioredoxin id=2241635 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
thioredoxin
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
15con1.8.AGTCAA_scaffold_4_23
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

31075..34383
DNA (3309bp) protein (1103aa)
DNA polymerase II large subunit (EC:2.7.7.7)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000379A68B rbh
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
15con1.8.AGTCAA_scaffold_4_24
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(34380..34706)
DNA (327bp) protein (109aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
15con1.8.AGTCAA_scaffold_4_25
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

34813..36507
DNA (1695bp) protein (565aa)
Membrane protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T1C2J4_9ZZZZ
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
15con1.8.AGTCAA_scaffold_4_26
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

36548..37633
DNA (1086bp) protein (362aa)
Putative glycosyltransferase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YV48_METPS
putative glycosyltransferase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
15con1.8.AGTCAA_scaffold_4_27
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

37700..38737
DNA (1038bp) protein (346aa)
glycosyl transferase family protein
Glycosyl transferase family 2 id=2162954 bin=GWB2_Geobacter-like_52_12 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
Tax=RBG_16_Euryarchaeota_67_27_curated
15con1.8.AGTCAA_scaffold_4_28
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(38759..39145)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00037B18B2
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_13_curated
Displaying items 1-30 of 87 in total

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