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2013_40cm_scaffold_0

Search features with annotation key words

Displaying items 1-30 of 691 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2013_40cm_scaffold_0_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(1..459)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XL77_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF59428.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedospha
2013_40cm_scaffold_0_2
unknown

Not on your lists

comp(503..661)
DNA (159bp) protein (53aa)

This feature has no annotations

2013_40cm_scaffold_0_3
unknown

Not on your lists

comp(745..963)
DNA (219bp) protein (73aa)

This feature has no annotations

2013_40cm_scaffold_0_4
unknown

Not on your lists

1033..1593
DNA (561bp) protein (187aa)

This feature has no annotations

2013_40cm_scaffold_0_5
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1927..3321
DNA (1395bp) protein (465aa)
Glutamate dehydrogenase (NADP(+)) (EC:1.4.1.4); K00262 glutamate dehydrogenase (NADP+) [EC:1.4.1.4] Tax=GWA2_Bacteroidetes_32_17_curated
Glutamate dehydrogenase (NADP(+)) (EC:1.4.1.4)
Glutamate dehydrogenase id=2237238 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
2013_40cm_scaffold_0_6
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3530..4954)
DNA (1425bp) protein (475aa)
hypothetical protein n=1 Tax=Hymenobacter aerophilus RepID=UPI00037EB981
glutamate dehydrogenase rbh
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
2013_40cm_scaffold_0_7
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5010..5360
DNA (351bp) protein (117aa)
Putative membrane protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JPN8_9BACT
Putative membrane protein {ECO:0000313|EMBL:ELR69332.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
hypothetical protein
2013_40cm_scaffold_0_8
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(5412..7220)
DNA (1809bp) protein (603aa)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KN63_SOLCM
single-stranded-DNA-specific exonuclease RecJ Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
single-stranded-DNA-specific exonuclease RecJ
2013_40cm_scaffold_0_9
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

comp(7250..8560)
DNA (1311bp) protein (437aa)
peptidase M24; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] Tax=CG_Bacteroid_01
Xaa-Pro aminopeptidase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KXF2_SOLCM
Xaa-Pro aminopeptidase
2013_40cm_scaffold_0_10
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8653..9900)
DNA (1248bp) protein (416aa)
Putative uncharacterized protein id=1742316 bin=GWE2_Bacteroidetes_42_24 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
hypothetical protein Tax=GWF2_Bacteroidetes_43_11_curated
hypothetical protein
2013_40cm_scaffold_0_11
Paenibacillus polymyxa, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9952..10497
DNA (546bp) protein (182aa)
Putative metal-dependent hydrolase yfiT {ECO:0000256|HAMAP-Rule:MF_01256}; EC=3.-.-.- {ECO:0000256|HAMAP-Rule:MF_01256};; TaxID=886882 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillac
Putative metal-dependent hydrolase bcere0022_20830 n=4 Tax=Bacillus RepID=C2W8E4_BACCE id=717487 bin=RAAC39 species=unknown genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RAAC39 organism_group=Ignavibacteria
metal-dependent hydrolase
2013_40cm_scaffold_0_12
RLO_Deltaproteobacteria_40_28, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10613..11449
DNA (837bp) protein (279aa)
integral membrane protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_40_28_curated
Putative integral membrane protein id=4324785 bin=GWA2_OP3_53_43 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
hypothetical protein
2013_40cm_scaffold_0_13
RLO_Deltaproteobacteria_40_28, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11573..13432
DNA (1860bp) protein (620aa)
sdhA; succinate dehydrogenase flavoprotein subunit; K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_40_28_curated
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] id=1250011 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
sdhA; succinate dehydrogenase flavoprotein subunit
2013_40cm_scaffold_0_14
GWA2_WOR_2_53_43_curated, WOR-2, Bacteria

Not on your lists

13518..14264
DNA (747bp) protein (249aa)
Putative succinate dehydrogenase, iron-sulfur subunit id=4324788 bin=GWA2_OP3_53_43 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
putative succinate dehydrogenase, iron-sulfur subunit Tax=GWA2_WOR_2_53_43_curated
succinate dehydrogenase and fumarate reductase iron-sulfur protein
2013_40cm_scaffold_0_15
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14383..17028
DNA (2646bp) protein (882aa)
Putative uncharacterized protein id=1853060 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein Tax=GWA2_Bacteroidetes_32_17_curated
hypothetical protein
2013_40cm_scaffold_0_16
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17105..17698
DNA (594bp) protein (198aa)
riboflavin synthase subunit alpha n=1 Tax=Pontibacter roseus RepID=UPI000381B13E
riboflavin synthase subunit alpha
Riboflavin synthase subunit alpha {ECO:0000313|EMBL:AKD04638.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
2013_40cm_scaffold_0_17
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(17701..18654)
DNA (954bp) protein (318aa)
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20) Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
5,10-methylenetetrahydrofolate reductase n=1 Tax=Flexithrix dorotheae RepID=UPI00035D4E12
2013_40cm_scaffold_0_18
unknown

Not on your lists

18862..19275
DNA (414bp) protein (138aa)

This feature has no annotations

2013_40cm_scaffold_0_19
unknown

Not on your lists

comp(19385..19909)
DNA (525bp) protein (175aa)

This feature has no annotations

2013_40cm_scaffold_0_20
unknown

Not on your lists

comp(19860..20372)
DNA (513bp) protein (171aa)

This feature has no annotations

2013_40cm_scaffold_0_21
unknown

Not on your lists

comp(20404..20853)
DNA (450bp) protein (150aa)

This feature has no annotations

2013_40cm_scaffold_0_22
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20900..22510)
DNA (1611bp) protein (537aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037DF8A9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17959.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1943
2013_40cm_scaffold_0_23
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22525..23550)
DNA (1026bp) protein (342aa)
Patatin n=1 Tax=Niabella soli DSM 19437 RepID=H1NR18_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17961.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1943
2013_40cm_scaffold_0_24
unknown

Not on your lists

comp(23575..24117)
DNA (543bp) protein (181aa)

This feature has no annotations

2013_40cm_scaffold_0_25
unknown

Not on your lists

comp(24117..24776)
DNA (660bp) protein (220aa)

This feature has no annotations

2013_40cm_scaffold_0_26
unknown

Not on your lists

comp(24773..24922)
DNA (150bp) protein (50aa)

This feature has no annotations

2013_40cm_scaffold_0_27
unknown

Not on your lists

comp(24959..25864)
DNA (906bp) protein (302aa)

This feature has no annotations

2013_40cm_scaffold_0_28
unknown

Not on your lists

comp(25931..26152)
DNA (222bp) protein (74aa)

This feature has no annotations

2013_40cm_scaffold_0_29
RBG_16_Deltaproteobacteria_44_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26253..27218)
DNA (966bp) protein (322aa)
Peptidase C1A, papain n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM67_9BACT
peptidase C1A, papain Tax=RBG_16_Deltaproteobacteria_44_11_curated
peptidase C1A, papain
2013_40cm_scaffold_0_30
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

27682..27993
DNA (312bp) protein (104aa)
hypothetical protein
Uncharacterized protein Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
Uncharacterized protein id=7201837 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
Displaying items 1-30 of 691 in total

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