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2013_40cm_scaffold_1

Search features with annotation key words

Displaying items 121-150 of 668 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2013_40cm_scaffold_1_119
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(114912..116867)
DNA (1956bp) protein (652aa)
OmpA/MotB domain-containing protein id=2043232 bin=GWD2_Bacteroidetes_33_33 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
OmpA/MotB domain-containing protein Tax=GWD2_Bacteroidetes_33_33_curated
outer membrane protein/peptidoglycan-associated (lipo)protein
2013_40cm_scaffold_1_120
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(116935..117579)
DNA (645bp) protein (215aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis prote
7-carboxy-7-deazaguanine synthase n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0NRL7_9SPHI
7-carboxy-7-deazaguanine synthase
2013_40cm_scaffold_1_121
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(117576..118460)
DNA (885bp) protein (295aa)
folD; methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] Tax=RIFCSPLOWO2_12_FUL
5,10-methylene-tetrahydrofolate dehydrogenase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000362D1D6
5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase
2013_40cm_scaffold_1_122
Capnocytophaga sp. oral taxon 329, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(118463..119791)
DNA (1329bp) protein (443aa)
Signal recognition particle protein n=1 Tax=Capnocytophaga sp. oral taxon 329 str. F0087 RepID=F3XQT2_9FLAO
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=706436 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteri
signal recognition particle protein
2013_40cm_scaffold_1_123
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

119870..121369
DNA (1500bp) protein (500aa)
hypothetical protein AtheD1_13678 id=3231063 bin=GWF2_Bacteroidetes_33_16 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein
Tax=BJP_08E140C01_Bacteriodales_41_10
2013_40cm_scaffold_1_124
GWA2_OD1_52_12, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

121425..122927
DNA (1503bp) protein (501aa)
histidine ammonia-lyase Tax=GWA2_OD1_52_12
Histidine ammonia-lyase id=2738072 bin=GWF1_Flavobacteria_32_7 species=Flavobacteria bacterium BAL38 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
histidine ammonia-lyase
2013_40cm_scaffold_1_125
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(122974..126039)
DNA (3066bp) protein (1022aa)
Thermolysin id=3991029 bin=GWF2_Bacteroidetes_38_335 species=Chryseobacterium gleum genus=Chryseobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
zinc metalloprotease Tax=GWF2_Bacteroidetes_38_335_curated
thermolysin
2013_40cm_scaffold_1_126
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

126243..126950
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003799454
LytTR family two component transcriptional regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ACU64027.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga
2013_40cm_scaffold_1_127
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(126964..129522)
DNA (2559bp) protein (853aa)
TonB-dependent receptor n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T839_NIAKG
Putative TonB-dependent receptor {ECO:0000313|EMBL:GAO44398.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavi
TonB-dependent receptor
2013_40cm_scaffold_1_128
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

129728..131773
DNA (2046bp) protein (682aa)
DNA ligase, nad-dependent (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
DNA ligase, nad-dependent (EC:6.5.1.2)
DNA ligase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3B7_PALPW
2013_40cm_scaffold_1_129
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

131815..132357
DNA (543bp) protein (181aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
Putative uncharacterized protein id=3810919 bin=GWF2_Bacteroidetes_29_10 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
hypothetical protein
2013_40cm_scaffold_1_130
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

132359..133237
DNA (879bp) protein (293aa)
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KRX1_SOLCM
dihydrodipicolinate synthase Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
dihydrodipicolinate synthase
2013_40cm_scaffold_1_131
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(133264..134547)
DNA (1284bp) protein (428aa)
glycine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
serine hydroxymethyltransferase n=1 Tax=Pontibacter roseus RepID=UPI00036AF6C4
glycine/serine hydroxymethyltransferase
2013_40cm_scaffold_1_132
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(134557..135546)
DNA (990bp) protein (330aa)
Nucleotidyl transferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PVA0_CHIPD
nucleotidyltransferase
Nucleotidyl transferase {ECO:0000313|EMBL:ACU64693.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinen
2013_40cm_scaffold_1_133
Muricauda lutaonensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

135635..136576
DNA (942bp) protein (314aa)
2-nitropropane dioxygenase n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11NV8_CYTH3
2-nitropropane dioxygenase NPD {ECO:0000313|EMBL:AKA35965.1}; TaxID=516051 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricauda lutaone
2-nitropropane dioxygenase rbh
2013_40cm_scaffold_1_134
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

136576..139047
DNA (2472bp) protein (824aa)
primosomal protein N'' Tax=CG_Bacteroid_01
primosomal protein n'''' id=2106264 bin=GWD2_Bacteroidetes_33_33 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
primosomal protein N''
2013_40cm_scaffold_1_135
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(139028..139963)
DNA (936bp) protein (312aa)
exopolyphosphatase Tax=GWA2_Bacteroidetes_30_7_curated
Exopolyphosphatase id=2924006 bin=GWF2_Bacteroidetes_33_38 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
exopolyphosphatase
2013_40cm_scaffold_1_136
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(139965..141308)
DNA (1344bp) protein (448aa)
ABC transporter permease id=4326493 bin=GWF2_Bacteroidetes_33_38 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
ABC transporter permease; K01992 ABC-2 type transport system permease protein Tax=GWF2_Bacteroidetes_33_38_curated
Na+ efflux pump ABC transporter permease
2013_40cm_scaffold_1_137
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(141305..142225)
DNA (921bp) protein (307aa)
ABC transporter ATPase Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
ABC transporter family protein id=4326498 bin=GWF2_Bacteroidetes_33_38 species=Bizionia argentinensis genus=Bizionia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
ABC transporter
2013_40cm_scaffold_1_138
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(142361..143077)
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000382AC0A
hypothetical protein; K09807 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
hypothetical protein
2013_40cm_scaffold_1_139
unknown

Not on your lists

143146..143445
DNA (300bp) protein (100aa)

This feature has no annotations

2013_40cm_scaffold_1_140
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(143554..144633)
DNA (1080bp) protein (360aa)
Cytochrome c class I n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGB0_NIAKG
Cytochrome C {ECO:0000313|EMBL:KIA88934.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
cytochrome c class I
2013_40cm_scaffold_1_141
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists


144731..147409
DNA (2679bp) protein (893aa)
valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
Valine--tRNA ligase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KUM9_SOLCM
valyl-tRNA synthetase
2013_40cm_scaffold_1_142
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

147431..148003
DNA (573bp) protein (191aa)
Glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YT35_AEQSU
glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase
Glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase {ECO:0000313|EMBL:AFL80153.1}; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Fla
2013_40cm_scaffold_1_143
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

148007..148384
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFJ8_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98429.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
2013_40cm_scaffold_1_144
unknown

Not on your lists

148381..148533
DNA (153bp) protein (51aa)

This feature has no annotations

2013_40cm_scaffold_1_145
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

148530..149078
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JPY7_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELR71026.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
2013_40cm_scaffold_1_146
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(149068..150543)
DNA (1476bp) protein (492aa)
Putative uncharacterized protein id=2619160 bin=GWF2_Bacteroidetes_43_63 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
hypothetical protein
Tax=BJP_08E140C01_Bacteriodales_41_10
2013_40cm_scaffold_1_147
unknown

Not on your lists

comp(150546..150668)
DNA (123bp) protein (41aa)

This feature has no annotations

2013_40cm_scaffold_1_148
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(150676..152067)
DNA (1392bp) protein (464aa)
Putative uncharacterized protein id=4268902 bin=GWA2_Ignavibacteria-rel_35_8 species=Thermoplasmatales archaeon SCGC AB-539-N05 genus=unknown taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
BNR/Asp-box repeat-containing protein
Displaying items 121-150 of 668 in total

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