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2013_40cm_scaffold_12

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Displaying items 1-30 of 324 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2013_40cm_scaffold_12_1
unknown

Not on your lists

comp(1..63)
DNA (63bp) protein (21aa)

This feature has no annotations

2013_40cm_scaffold_12_2

Not on your lists

comp(326..562)
DNA (237bp) protein (79aa)
Marine sediment metagenome DNA, contig: S01H4_C02350 {ECO:0000313|EMBL:GAG60202.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
2013_40cm_scaffold_12_3
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

849..1337
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003613C8B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI52165.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 2953
2013_40cm_scaffold_12_4
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1312..2487
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037AE4B8
UBA/THIF-type NAD/FAD binding protein
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:AEI52164.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (st
2013_40cm_scaffold_12_5
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2495..4444
DNA (1950bp) protein (650aa)
Putative uncharacterized protein id=4397277 bin=GWF2_Bacteroidetes_40_14 species=Synechococcus sp. genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
hypothetical protein Tax=GWF2_Bacteroidetes_40_14_curated
hypothetical protein
2013_40cm_scaffold_12_6
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4441..4785
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FRY3_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EEI94348.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact
hypothetical protein
2013_40cm_scaffold_12_7
GWF2_OD1_38_76, Parcubacteria, Bacteria

Not on your lists

comp(4869..6497)
DNA (1629bp) protein (543aa)
Putative Site-specific recombinase Tax=GWF2_OD1_38_76
site-specific recombinase id=5100299 bin=WS6_GWC1_33_20 species=WS6_GWE1_33_547 genus=WS6_GWE1_33_547 taxon_order=WS6_GWE1_33_547 taxon_class=WS6_GWE1_33_547 phylum=WS6 tax=WS6_GWC1_33_20 organism_group=WS6 (Doikabacteria)
site-specific recombinase
2013_40cm_scaffold_12_8
unknown

Not on your lists

comp(6466..6702)
DNA (237bp) protein (79aa)

This feature has no annotations

2013_40cm_scaffold_12_9
BJP_08E140C01_Falkowbacteria_33_19, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

6902..8164
DNA (1263bp) protein (421aa)
hypothetical protein n=2 Tax=Aminicenantes RepID=UPI00037DC3B8
hypothetical protein
Tax=BJP_08E140C01_Falkowbacteria_33_19
2013_40cm_scaffold_12_10
unknown

Not on your lists

8276..8368
DNA (93bp) protein (31aa)

This feature has no annotations

2013_40cm_scaffold_12_11
unknown

Not on your lists

8547..9203
DNA (657bp) protein (219aa)

This feature has no annotations

2013_40cm_scaffold_12_12
unknown

Not on your lists

comp(9136..9270)
DNA (135bp) protein (45aa)

This feature has no annotations

2013_40cm_scaffold_12_13
BJP_IG2069_Syntrophobacterales_46_30, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9590..11077
DNA (1488bp) protein (496aa)
Site-specific recombinase n=1 Tax=mine drainage metagenome RepID=E6PH41_9ZZZZ
site-specific recombinase
Tax=BJP_IG2069_Syntrophobacterales_46_30
2013_40cm_scaffold_12_14
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(11064..12119)
DNA (1056bp) protein (352aa)
Mg chelatase-related protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R151_OWEHD
Mg chelatase-like protein
Tax=BJP_IG2103_Bacteroidetes_41_9
2013_40cm_scaffold_12_15
Serratia sp. M24T3, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12204..12593
DNA (390bp) protein (130aa)
lipoprotein involved with copper homeostasis and adhesion n=1 Tax=gamma proteobacterium WG36 RepID=UPI0003716C92
Lipoprotein involved with copper homeostasis and adhesion {ECO:0000313|EMBL:EIC83082.1}; TaxID=932213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Ser
copper homeostasis protein
2013_40cm_scaffold_12_16
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12646..15384)
DNA (2739bp) protein (913aa)
Zinc protease {ECO:0000313|EMBL:CCH54997.1}; EC=3.4.-.- {ECO:0000313|EMBL:CCH54997.1};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fi
pseudouridine synthase n=1 Tax=Spirosoma spitsbergense RepID=UPI00037FB0DA
pseudouridine synthase
2013_40cm_scaffold_12_17
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15605..16429
DNA (825bp) protein (275aa)
Arginine-specific cysteine proteinase id=3680895 bin=GWF2_Bacteroidetes_35_48 species=Bacteroidetes oral taxon 274 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
Arginine-specific cysteine proteinase Tax=GWF2_Bacteroidetes_35_48_curated
2013_40cm_scaffold_12_18
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16544..17374
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000380D69B
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
hypothetical protein
2013_40cm_scaffold_12_19
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17387..19429)
DNA (2043bp) protein (681aa)
Thiol:disulfide interchange protein DsbD {ECO:0000313|EMBL:KHJ38292.1}; EC=1.8.1.8 {ECO:0000313|EMBL:KHJ38292.1};; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales;
protein-disulfide reductase (EC:1.8.1.8)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002D96544
2013_40cm_scaffold_12_20
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19507..20256)
DNA (750bp) protein (250aa)
ABC-type uncharacterized transport system, ATPase component n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KVJ4_SOLCM
ABC transporter ATPase
ABC-type uncharacterized transport system, ATPase component {ECO:0000313|EMBL:AFD06497.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sol
2013_40cm_scaffold_12_21
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20253..21095)
DNA (843bp) protein (281aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y1A6_9SPHI
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:EHQ30240.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacte
ABC transporter permease
2013_40cm_scaffold_12_22
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

21111..24044
DNA (2934bp) protein (978aa)
excinuclease ABC subunit A; K03701 excinuclease ABC subunit A Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
Excinuclease ABC, A subunit id=1789851 bin=GWE2_Bacteroidetes_42_24 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
uvrA3; excinuclease ABC, A subunit
2013_40cm_scaffold_12_23
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24316..25452
DNA (1137bp) protein (379aa)
TIGR03118 family protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KQ92_SOLCM
hypothetical protein
TIGR03118 family protein {ECO:0000313|EMBL:AFD06387.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canaden
2013_40cm_scaffold_12_24
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25630..26514
DNA (885bp) protein (295aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus 3_8_47FAA RepID=F7LER0_BACOV
DNA modification methylase
Tax=BJP_08E140C01_Flavobacteriales_35_8
2013_40cm_scaffold_12_25
unknown

Not on your lists

26751..28040
DNA (1290bp) protein (430aa)

This feature has no annotations

2013_40cm_scaffold_12_26
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28037..30811
DNA (2775bp) protein (925aa)
Uncharacterized protein {ECO:0000313|EMBL:KFF11240.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis
2013_40cm_scaffold_12_27
unknown

Not on your lists

30811..31056
DNA (246bp) protein (82aa)

This feature has no annotations

2013_40cm_scaffold_12_28

Not on your lists

31077..31667
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5ITT8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKM74897.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
2013_40cm_scaffold_12_29
Paenibacillus sp. FSL R7-277, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31762..34788
DNA (3027bp) protein (1009aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BNL1100 RepID=H2JEC9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETT73301.1}; TaxID=1227352 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-277.;"
hypothetical protein
2013_40cm_scaffold_12_30
unknown

Not on your lists

34819..35616
DNA (798bp) protein (266aa)

This feature has no annotations

Displaying items 1-30 of 324 in total

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