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2013_40cm_scaffold_3

Search features with annotation key words

Displaying items 121-150 of 329 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2013_40cm_scaffold_3_120
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

158887..159081
DNA (195bp) protein (65aa)
id=3730935 Tax=GWF2_Nitrospirae_44_13_curated
2013_40cm_scaffold_3_121
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

159182..161011
DNA (1830bp) protein (610aa)
Family 3 adenylate cyclase id=4961029 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
family 3 adenylate cyclase
Tax=BJP_IG2103_Bacteroidetes_41_9
2013_40cm_scaffold_3_122
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(161023..162198)
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI00031A1154
Fmu (Sun) domain-containing protein
Fmu (Sun) domain protein {ECO:0000313|EMBL:ADY52489.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedo
2013_40cm_scaffold_3_123
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(162225..164561)
DNA (2337bp) protein (779aa)
DNA topoisomerase (EC:5.99.1.3); K02621 topoisomerase IV subunit A [EC:5.99.1.-] Tax=GWD2_Bacteroidetes_33_33_curated
DNA topoisomerase IV subunit A id=3917428 bin=GWC2_Bacteroidetes_33_15 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_33_15 organism_group=Bacteroidetes organism_desc=Good +
DNA gyrase/topoisomerase IV subunit A
2013_40cm_scaffold_3_124
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

comp(164579..166444)
DNA (1866bp) protein (622aa)
Topoisomerase IV subunit B n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JMU2_9BACT
type IIA topoisomerase subunit B Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
type IIA topoisomerase subunit B
2013_40cm_scaffold_3_125
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(166583..166840)
DNA (258bp) protein (86aa)
UPF0235 protein Slin_4812 n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QQK9_SPILD
hypothetical protein
UPF0235 protein Slin_4812 {ECO:0000256|HAMAP-Rule:MF_00634}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATC
2013_40cm_scaffold_3_126
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(166837..167862)
DNA (1026bp) protein (342aa)
Por secretion system C-terminal sorting domain containing protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2KPQ1_9FLAO
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
2013_40cm_scaffold_3_127
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(167914..168969)
DNA (1056bp) protein (352aa)
DNA mismatch repair protein id=3903442 bin=GWF2_Bacteroidetes_40_13 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
Smr domain./Domain of unknown function (DUF2027).
2013_40cm_scaffold_3_128
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(168929..169849)
DNA (921bp) protein (307aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
Putative uncharacterized protein id=3221263 bin=GWF2_Bacteroidetes_43_11 species=Kordia algicida genus=Kordia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
putative periplasmic lipoprotein
2013_40cm_scaffold_3_129
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(169859..171265)
DNA (1407bp) protein (469aa)
phosphoglucosamine mutase (EC:5.4.2.10) Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJD2_FLUTR
2013_40cm_scaffold_3_130
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

comp(171278..172378)
DNA (1101bp) protein (367aa)
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
2013_40cm_scaffold_3_131
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(172443..174476)
DNA (2034bp) protein (678aa)
Cytochrome c biogenesis factor n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R3Y8_OWEHD
cytochrome c biogenesis factor Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
cytochrome c biogenesis factor
2013_40cm_scaffold_3_132
RBG_13_Bacteroidetes_43_22_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(174487..175011)
DNA (525bp) protein (175aa)
acetyltransferase, ribosomal protein N-acetylase; K00657 diamine N-acetyltransferase [EC:2.3.1.57] Tax=RBG_13_Bacteroidetes_43_22_curated
Acetyltransferase n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J519_9FLAO
acetyltransferase
2013_40cm_scaffold_3_133
RBG_13_Bacteroidetes_43_22_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(175070..175870)
DNA (801bp) protein (267aa)
diaminopimelate epimerase; K01778 diaminopimelate epimerase [EC:5.1.1.7] Tax=RBG_13_Bacteroidetes_43_22_curated
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FG14_9BACT
2013_40cm_scaffold_3_134
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

176123..177571
DNA (1449bp) protein (483aa)
degQ; serine protease (EC:3.4.21.-); K01362 [EC:3.4.21.-] Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
protease do id=4607772 bin=GWF2_Bacteroidetes_29_10 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
deoxyribonuclease HsdR
2013_40cm_scaffold_3_135
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

177722..178585
DNA (864bp) protein (288aa)
RNA polymerase, sigma 70 subunit, RpoD subfamily n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBQ1_FLUTR
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
RpoD subfamily RNA polymerase sigma-70 subunit
2013_40cm_scaffold_3_136
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

178804..180285
DNA (1482bp) protein (494aa)
Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KQA0_SOLCM
glyceraldehyde-3-phosphate dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
glyceraldehyde-3-phosphate dehydrogenase
2013_40cm_scaffold_3_137
unknown

Not on your lists

comp(180293..180709)
DNA (417bp) protein (139aa)

This feature has no annotations

2013_40cm_scaffold_3_138
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(180771..184181)
DNA (3411bp) protein (1137aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=929556 species="Bacteria; Ba
Transcription-repair-coupling factor n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KX66_SOLCM
transcription-repair coupling factor Mfd
2013_40cm_scaffold_3_139
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

184219..185007
DNA (789bp) protein (263aa)
ABC-type Fe3+-hydroxamate transport system, periplasmic component n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KQ63_SOLCM
Fe3+-hydroxamate ABC transporter periplasmic protein
ABC-type Fe3+-hydroxamate transport system, periplasmic component {ECO:0000313|EMBL:AFD06231.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriacea
2013_40cm_scaffold_3_140
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

185059..187353
DNA (2295bp) protein (765aa)
patatin; K07001 NTE family protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
Patatin id=3922616 bin=GWF2_Bacteroidetes_29_10 species=Pedobacter heparinus genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
patatin
2013_40cm_scaffold_3_141
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(187488..189656)
DNA (2169bp) protein (723aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=929556
Polyribonucleotide nucleotidyltransferase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KVW7_SOLCM
polyribonucleotide nucleotidyltransferase
2013_40cm_scaffold_3_142
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists


comp(189748..190017)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0P5_FLAB3
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia
rpsO; 30S ribosomal protein S15
2013_40cm_scaffold_3_143
unknown

Not on your lists

comp(190226..191068)
DNA (843bp) protein (281aa)

This feature has no annotations

2013_40cm_scaffold_3_144
unknown

Not on your lists

comp(191209..191439)
DNA (231bp) protein (77aa)

This feature has no annotations

2013_40cm_scaffold_3_145
RBG_16_OP11_Levybacteria_35_11_curated, Levybacteria, Microgenomates, Bacteria

Not on your lists

191683..192075
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Alcanivorax sp. PN-3 RepID=U7I4B6_9GAMM
membrane-bound metal-dependent hydrolase; K07038 inner membrane protein Tax=RBG_16_OP11_Levybacteria_35_11_curated
Membrane protein containing bound metal-dependent hydrolase
2013_40cm_scaffold_3_146
R_SM2F11_45_18, SM2F11, Bacteria

Not on your lists

192157..192639
DNA (483bp) protein (161aa)
Putative uncharacterized protein Tax=RIFCSPHIGHO2_01_FULL_SM2F11_45_18_curated
2013_40cm_scaffold_3_147
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(192844..194919)
DNA (2076bp) protein (692aa)
dipeptidyl-peptidase III (EC:3.4.14.4) rbh
Dipeptidyl-peptidase III {ECO:0000313|EMBL:ACB76325.1}; EC=3.4.14.4 {ECO:0000313|EMBL:ACB76325.1};; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutacea
Dipeptidyl-peptidase III n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ02_OPITP
2013_40cm_scaffold_3_148
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

195216..196196
DNA (981bp) protein (327aa)
muconate cycloisomerase id=4563128 bin=GWF2_Bacteroidetes_41_9 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
L-alanine-DL-glutamate epimerase-like protein Tax=GWA2_Bacteroidetes_40_15_curated
putative muconate cycloisomerase
2013_40cm_scaffold_3_149
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(196208..202765)
DNA (6558bp) protein (2186aa)
PKD domain-containing protein Tax=CG_Bacteroid_02
FG-GAP repeat protein id=4430096 bin=GWF2_Bacteroidetes_29_10 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
hypothetical protein
Displaying items 121-150 of 329 in total

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