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2013_40cm_scaffold_3

Search features with annotation key words

Displaying items 1-30 of 329 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2013_40cm_scaffold_3_1
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2..904
DNA (903bp) protein (301aa)
PKD domain-containing protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
Cell wall surface anchor family protein id=1850634 bin=GWE2_Bacteroidetes_42_42 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
PKD domain-containing protein
2013_40cm_scaffold_3_2
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

930..5360
DNA (4431bp) protein (1477aa)
cell wall surface anchor family protein (EC:3.2.1.-)
FG-GAP repeat-containing protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
PKD domain containing protein id=1990589 bin=GWE2_Bacteroidetes_29_8 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
2013_40cm_scaffold_3_3
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5437..6621)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KC48_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH01701.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
2013_40cm_scaffold_3_4
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

6878..8248
DNA (1371bp) protein (457aa)
Gamma-glutamyl carboxylase-like protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11XB0_CYTH3
HTTM domain-containing protein Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
gamma-glutamyl carboxylase-like protein
2013_40cm_scaffold_3_5
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8297..9619
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI0003689904
phosphatidic acid phosphatase
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:CCH56951.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma li
2013_40cm_scaffold_3_6
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9616..13170
DNA (3555bp) protein (1185aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003646F7B
FG-GAP repeat-containing protein {ECO:0000313|EMBL:AHM59703.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Fla
ASPIC/UnbV-like protein
2013_40cm_scaffold_3_7
unknown

Not on your lists

13492..14142
DNA (651bp) protein (217aa)

This feature has no annotations

2013_40cm_scaffold_3_8
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14171..19936
DNA (5766bp) protein (1922aa)
Uncharacterized protein {ECO:0000313|EMBL:KGO95525.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium ens
CHU large protein; uncharacterized id=3429108 bin=GWF2_Bacteroidetes_38_335 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hypothetical protein
2013_40cm_scaffold_3_9
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20074..22290
DNA (2217bp) protein (739aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8REZ0_DESPD
PAS/PAC sensor hybrid histidine kinase
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:ADW17073.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source=
2013_40cm_scaffold_3_10
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22287..22685
DNA (399bp) protein (133aa)
Two-component response regulator n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZGB9_9BACT
Two-component response regulator {ECO:0000313|EMBL:EAY30536.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 2
response regulator receiver
2013_40cm_scaffold_3_11
unknown

Not on your lists

comp(22724..22831)
DNA (108bp) protein (36aa)

This feature has no annotations

2013_40cm_scaffold_3_12
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23106..24455
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SK19_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGO96822.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium ens
peptidase domain protein
2013_40cm_scaffold_3_13
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24512..33436
DNA (8925bp) protein (2975aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI000379B660
putative adhesin
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
2013_40cm_scaffold_3_14
unknown

Not on your lists

33881..34429
DNA (549bp) protein (183aa)

This feature has no annotations

2013_40cm_scaffold_3_15
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

34473..44843
DNA (10371bp) protein (3457aa)
PDK repeat-containing protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KPG3_SOLCM
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
PDK repeat-containing protein
2013_40cm_scaffold_3_trna_2
unknown

Not on your lists

comp(44958..45030)
DNA (73bp)
transferRNA
2013_40cm_scaffold_3_16
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(45151..45930)
DNA (780bp) protein (260aa)
Methyltransferase family protein n=2 Tax=Alistipes RepID=I3YPX6_ALIFI
methyltransferase family protein
Methyltransferase family protein {ECO:0000313|EMBL:CCZ77475.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="A
2013_40cm_scaffold_3_17
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(45975..46376)
DNA (402bp) protein (134aa)
Sporulation domain-containing protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YEF5_9SPHI
sporulation domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
sporulation-like protein
2013_40cm_scaffold_3_18
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

46565..47800
DNA (1236bp) protein (412aa)
Cytochrome c551/c552 n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KX47_SOLCM
cytochrome c551/c552
Cytochrome c551/c552 {ECO:0000313|EMBL:AFD08376.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="So
2013_40cm_scaffold_3_19
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

47807..50869
DNA (3063bp) protein (1021aa)
nrfC; molybdopterin oxidoreductase, iron-sulfur binding subunit (EC:1.2.7.-)
Quinol:cytochrome c oxidoreductase iron-sulfur protein {ECO:0000313|EMBL:ABG59475.1}; EC=1.2.7.- {ECO:0000313|EMBL:ABG59475.1};; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales
Quinol:cytochrome c oxidoreductase iron-sulfur protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11SY9_CYTH3
2013_40cm_scaffold_3_20
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

50976..52355
DNA (1380bp) protein (460aa)
molybdopterin oxidoreductase n=1 Tax=Flavobacterium sp. MS220-5C RepID=UPI00034A8A06
Molybdopterin oxidoreductase {ECO:0000313|EMBL:KFC60875.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacteriu
molybdopterin oxidoreductase
2013_40cm_scaffold_3_21
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

52348..52860
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Flavobacterium sp. MS220-5C RepID=UPI0003451BA4
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
quinol:cytochrome c oxidoreductase membrane protein
2013_40cm_scaffold_3_22
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

52890..53546
DNA (657bp) protein (219aa)
Cytochrome c553 n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KX43_SOLCM
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
cytochrome c553
2013_40cm_scaffold_3_23
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

53649..54818
DNA (1170bp) protein (390aa)
quinol:cytochrome C oxidoreductase n=1 Tax=Pontibacter roseus RepID=UPI00035F29D9
quinol:cytochrome C oxidoreductase
Uncharacterized protein {ECO:0000313|EMBL:KHJ38596.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter gluco
2013_40cm_scaffold_3_24
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

54927..55946
DNA (1020bp) protein (340aa)
Cytochrome c oxidase subunit 2 n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R2B3_OWEHD
heme/copper-type cytochrome/quinol oxidase subunit 2 Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
heme/copper-type cytochrome/quinol oxidase subunit 2
2013_40cm_scaffold_3_25
Schleiferia thermophila, Schleiferia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

55968..57794
DNA (1827bp) protein (609aa)
Heme/copper-type cytochrome/quinol oxidase, subunit 1 n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R2B2_OWEHD
Cytochrome C oxidase {ECO:0000313|EMBL:KFD38147.1}; TaxID=1453500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Schleiferiaceae; Schleiferia.;" source="Schleiferia thermophila st
heme/copper-type cytochrome/quinol oxidase, subunit 1
2013_40cm_scaffold_3_26
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(58051..59298)
DNA (1248bp) protein (416aa)
aspartate transaminase (EC:2.6.1.1)
Aspartate transaminase {ECO:0000313|EMBL:AEA42629.1}; EC=2.6.1.1 {ECO:0000313|EMBL:AEA42629.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluvii
Aspartate transaminase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IH74_FLUTR
2013_40cm_scaffold_3_27
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(59654..60328)
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00038129A0
Uncharacterized protein {ECO:0000313|EMBL:KEQ30713.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antar
hypothetical protein
2013_40cm_scaffold_3_28
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(60332..62473)
DNA (2142bp) protein (714aa)
Ferrous iron transport protein B n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SBX5_PEDSD
ferrous iron transport protein B; K04759 ferrous iron transport protein B Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
ferrous iron transport protein B
2013_40cm_scaffold_3_29
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(62536..62760)
DNA (225bp) protein (75aa)
FeoA family protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y4V8_9SPHI
Ferrous iron transport protein A {ECO:0000313|EMBL:KHJ39165.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobac
Fe2+ transport system protein A
Displaying items 1-30 of 329 in total

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