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2013_60cm_scaffold_22

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Displaying items 1-30 of 387 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2013_60cm_scaffold_22_1
unknown

Not on your lists

3..83
DNA (81bp) protein (27aa)

This feature has no annotations

2013_60cm_scaffold_22_2
unknown

Not on your lists

143..313
DNA (171bp) protein (57aa)

This feature has no annotations

2013_60cm_scaffold_22_3
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

Not on your lists

408..1250
DNA (843bp) protein (281aa)
signal peptide protein (EC:3.1.-.-) Tax=RBG_16_Zixibacteria_50_21_curated
Putative uncharacterized protein n=1 Tax=Burkholderia sp. CCGE1001 RepID=E8YN05_9BURK
hypothetical protein
2013_60cm_scaffold_22_4
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1254..1688
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI0003804D19
Tautomerase enzyme {ECO:0000313|EMBL:KJL37107.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
4-oxalocrotonate tautomerase family protein
2013_60cm_scaffold_22_5

Not on your lists

1891..2427
DNA (537bp) protein (179aa)
DNA-3-methyladenine glycosylase I (EC:3.2.2.20)
Methyladenine glycosylase {ECO:0000313|EMBL:AIA16559.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
DNA-3-methyladenine glycosylase I id=2217408 bin=GWA2_Elusimicrobia_69_24 species=ACD73 genus=ACD73 taxon_order=ACD73 taxon_class=ACD73 phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
2013_60cm_scaffold_22_6
unknown

Not on your lists

comp(2340..3170)
DNA (831bp) protein (277aa)

This feature has no annotations

2013_60cm_scaffold_22_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

3419..4726
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACR3_GEMAT
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AHG90456.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_22_8
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5279..6496
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAD5_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39733.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
2013_60cm_scaffold_22_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6891..7847
DNA (957bp) protein (319aa)
putative threonine dehydratase (EC:4.3.1.19)
Putative threonine dehydratase {ECO:0000313|EMBL:BAH39735.1}; EC=4.3.1.19 {ECO:0000313|EMBL:BAH39735.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmati
Putative threonine dehydratase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAD7_GEMAT
2013_60cm_scaffold_22_10
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7909..8481)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI000381E347
putative uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:CDG82048.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobact
2013_60cm_scaffold_22_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

8629..9594
DNA (966bp) protein (322aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181
Ribonuclease Z n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RNZ_GEMAT
Ribonuclease Z
2013_60cm_scaffold_22_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9545..9838)
DNA (294bp) protein (98aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91869.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_22_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9856..10347)
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SP93_PLABD
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
Protein of unknown function DUF2203
2013_60cm_scaffold_22_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10298..10783)
DNA (486bp) protein (162aa)
Thioesterase superfamily protein n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZZC1_MAHA5
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
thioesterase superfamily protein
2013_60cm_scaffold_22_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10780..11949)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAE4_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91872.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_22_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12118..13158
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EBD5_THECK
Putative glycosyl hydrolase domain DUF4015
Putative glycosyl hydrolase domain DUF4015 {ECO:0000313|EMBL:AHG91873.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_22_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13160..14386)
DNA (1227bp) protein (409aa)
Cysteine desulfurase family protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XI18_9BACT
cysteine desulfurase family protein
Cysteine desulfurase family protein {ECO:0000313|EMBL:AHG91877.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_22_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14426..14653
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI000379233D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91879.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_22_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14650..15561
DNA (912bp) protein (304aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAE9_GEMAT
protein of unknown function DUF6 transmembrane
Uncharacterized protein {ECO:0000313|EMBL:AHG91884.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_22_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(15529..17457)
DNA (1929bp) protein (643aa)
acyl-CoA dehydrogenase; K00257 [EC:1.3.99.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Acyl-CoA dehydrogenase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RNS1_9ACTO id=5225245 bin=16ft_combo_ws3_JS1 species=Micromonospora sp. ATCC 39149 genus=Micromonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
acyl-CoA dehydrogenase
2013_60cm_scaffold_22_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(17474..18211)
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V0L2_ROSS1 id=5225171 bin=16ft_combo_ws3_JS1 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Surfeit locus 1 family protein
Surfeit locus 1 family protein {ECO:0000313|EMBL:AHG91886.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_22_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(18245..19054)
DNA (810bp) protein (270aa)
Uncharacterized conserved protein n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EUC4_9BACT
protein of unknown function DUF72
Uncharacterized protein {ECO:0000313|EMBL:AHG91889.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_22_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19178..19762
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003734B05
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91891.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_22_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19812..20168)
DNA (357bp) protein (119aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91896.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_22_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(20225..20920)
DNA (696bp) protein (232aa)
DtxR family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAF6_GEMAT
iron dependent repressor
Iron dependent repressor {ECO:0000313|EMBL:AHG91898.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_22_26
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(20917..21402)
DNA (486bp) protein (162aa)
Universal stress protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAF7_GEMAT
usp; universal stress protein
Universal stress protein {ECO:0000313|EMBL:BAH39755.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T
2013_60cm_scaffold_22_27
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21390..22760)
DNA (1371bp) protein (457aa)
Divalent metal cation transporter MntH n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAF8_GEMAT
Manganese transport protein mntH
Divalent metal cation transporter MntH {ECO:0000256|HAMAP-Rule:MF_00221}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_22_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

22832..23233
DNA (402bp) protein (134aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZRC7_OPITP
Glyoxalase-like domain protein
Glyoxalase-like domain protein {ECO:0000313|EMBL:AHG92524.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_22_29
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23244..23906)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAG0_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39758.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
2013_60cm_scaffold_22_30
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23908..24258)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAG1_GEMAT
Rhodanese-like protein
Rhodanese-like protein {ECO:0000313|EMBL:AHG91905.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying items 1-30 of 387 in total

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