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2013_60cm_scaffold_241

Search features with annotation key words

Displaying items 1-30 of 48 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2013_60cm_scaffold_241_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..2051)
DNA (2049bp) protein (683aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMA
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAF4_GEMAT
1,4-alpha-glucan-branching enzyme
2013_60cm_scaffold_241_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2048..4228)
DNA (2181bp) protein (727aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacteriu
glycogen debranching enzyme GlgX
Glycogen debranching enzyme id=4799902 bin=GWA2_Methylomirabilis_73_35 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
2013_60cm_scaffold_241_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4311..5501)
DNA (1191bp) protein (397aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Metal dependent phosphohydrolase id=4510911 bin=GWC2_Nitrospirae_57_13 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
2013_60cm_scaffold_241_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5498..7627)
DNA (2130bp) protein (710aa)
HEAT-like repeat-containing protein n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A5D0_PELCD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
HEAT-like repeat-containing protein
2013_60cm_scaffold_241_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7733..8563)
DNA (831bp) protein (277aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG87978.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_241_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8560..9072)
DNA (513bp) protein (171aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC64_GEMAT
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG87979.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_241_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9199..9480
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00036C5FC1
arsR; arsenical resistance operon repressor; K03892 ArsR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
transcriptional repressor protein, MerR
2013_60cm_scaffold_241_8
unknown

Not on your lists

9542..9721
DNA (180bp) protein (60aa)

This feature has no annotations

2013_60cm_scaffold_241_9
Thermus sp. KI-P1, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

9896..10996
DNA (1101bp) protein (367aa)
Thermophilic protease (Fragment) n=1 Tax=Thermus sp. KI-P1 RepID=Q64FJ8_9DEIN
Thermophilic protease {ECO:0000313|EMBL:AAU14826.1}; Flags: Fragment;; TaxID=291998 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus sp. KI-P1.;"
peptidase S8/S53 subtilisin kexin sedolisin
2013_60cm_scaffold_241_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

11154..13169
DNA (2016bp) protein (672aa)
Transketolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEC1_GEMAT
transketolase
Transketolase {ECO:0000313|EMBL:AHG89069.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_241_11
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13354..14079)
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI000366C3E6
Uncharacterized protein {ECO:0000313|EMBL:KJC60218.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
hypothetical protein
2013_60cm_scaffold_241_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14190..15482)
DNA (1293bp) protein (431aa)
Isopenicillin N epimerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAJ1_GEMAT
aminotransferase class V
Aminotransferase class V {ECO:0000313|EMBL:AHG87631.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_241_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15583..16605
DNA (1023bp) protein (341aa)
Metallo-beta-lactamase domain protein n=1 Tax=Selenomonas noxia ATCC 43541 RepID=D4S6N0_9FIRM
beta-lactamase domain protein
Beta-lactamase domain protein {ECO:0000313|EMBL:AHG89064.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_241_14
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

Not on your lists

comp(16797..19088)
DNA (2292bp) protein (764aa)
bglX; beta-glucosidase; K05349 beta-glucosidase [EC:3.2.1.21] Tax=RBG_13_Caldithrix_44_9_curated
Beta-glucosidase-like glycosyl hydrolase n=1 Tax=Xenococcus sp. PCC 7305 RepID=L8M232_9CYAN
beta-glucosidase-like glycosyl hydrolase
2013_60cm_scaffold_241_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19209..21773)
DNA (2565bp) protein (855aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADR7_GEMAT
peptidase M10A and M12B matrixin and adamalysin
Peptidase M10A and M12B matrixin and adamalysin {ECO:0000313|EMBL:AHG91587.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_241_16
unknown

Not on your lists

comp(21895..22191)
DNA (297bp) protein (99aa)

This feature has no annotations

2013_60cm_scaffold_241_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(22191..23306)
DNA (1116bp) protein (372aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7P5_ANADF
RmuC-domain protein
RmuC-domain protein {ECO:0000313|EMBL:AHG93503.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_241_18
Nodularia spumigena, Nodularia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

23415..24932
DNA (1518bp) protein (506aa)
Putative oxidoreductase protein n=1 Tax=Nodularia spumigena CCY9414 RepID=A0ZKF7_NODSP
Putative oxidoreductase protein {ECO:0000313|EMBL:AHJ30829.1}; TaxID=313624 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nodularia.;" source="Nodularia spumigena CCY9414.;"
glycine/D-amino acid oxidase, deaminating
2013_60cm_scaffold_241_19
unknown

Not on your lists

comp(24914..25129)
DNA (216bp) protein (72aa)

This feature has no annotations

2013_60cm_scaffold_241_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

25305..25970
DNA (666bp) protein (222aa)
Transcriptional regulator, TetR family n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QZ89_CHLT3
regulatory protein TetR
Regulatory protein TetR {ECO:0000313|EMBL:AHG89317.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_241_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

25967..27262
DNA (1296bp) protein (432aa)
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:AHG89316.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Outer membrane efflux protein id=2399064 bin=GWA2_Ignavibacteria-rel_35_8 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
2013_60cm_scaffold_241_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

27262..28173
DNA (912bp) protein (304aa)
membrane protein n=1 Tax=Spirosoma spitsbergense RepID=UPI0003791B5B
putative ABC transport system, lipoprotein
Putative ABC transport system, lipoprotein {ECO:0000313|EMBL:AHG89315.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_241_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

28170..29102
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EPE4_9BACE
ABC transporter related protein
ABC transporter related protein {ECO:0000313|EMBL:AHG89314.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_241_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

29099..29860
DNA (762bp) protein (254aa)
ABC transporter related n=1 Tax=Chlorobaculum parvum (strain NCIB 8327) RepID=B3QNF4_CHLP8
ABC transporter related protein
ABC transporter related protein {ECO:0000313|EMBL:AHG89313.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_241_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

29857..30966
DNA (1110bp) protein (370aa)
ABC-2 type transporter n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QZ83_CHLT3
ABC-2 type transporter
ABC-2 type transporter {ECO:0000313|EMBL:AHG89312.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_241_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

30966..32075
DNA (1110bp) protein (370aa)
ABC-2 n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YSW4_9CHLB
putative ABC transport system, membrane protein
Putative ABC transport system, membrane protein {ECO:0000313|EMBL:AHG89311.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_241_27
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

32257..34344
DNA (2088bp) protein (696aa)
TonB-dependent outer membrane transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9Z2_GEMAT
TonB-dependent outer membrane transport protein
TonB-dependent outer membrane transport protein {ECO:0000313|EMBL:BAH39590.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimon
2013_60cm_scaffold_241_28
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

34425..35843
DNA (1419bp) protein (473aa)
hypothetical protein Tax=RBG_13_OP8X_37_8_curated
2013_60cm_scaffold_241_29
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

35878..36474
DNA (597bp) protein (199aa)
SNARE associated Golgi protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UPY8_METS4
putative membrane-associated protein
Putative membrane-associated protein {ECO:0000313|EMBL:AHY48179.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" so
2013_60cm_scaffold_241_30
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(36443..36916)
DNA (474bp) protein (158aa)
DinB superfamily protein n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7N077_9BACT
DinB superfamily protein {ECO:0000313|EMBL:EMR02098.1}; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanensis AM
hypothetical protein
Displaying items 1-30 of 48 in total

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