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2013_60cm_scaffold_27

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Displaying items 1-30 of 148 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2013_60cm_scaffold_27_1
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(190..954)
DNA (765bp) protein (255aa)
Putative Major facilitator superfamily (MFS_1) transporter n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T408_9BRAD
Putative Major facilitator superfamily (MFS_1) transporter {ECO:0000313|EMBL:CCE01185.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhiz
hypothetical protein
2013_60cm_scaffold_27_2
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(1052..1534)
DNA (483bp) protein (161aa)
transcriptional regulator, MarR family id=14426137 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin1_lowGC organism_group=Unknown_CP
transcriptional regulator, MarR family Tax=CSP1_2_Dadabacteria
MarR family transcriptional regulator
2013_60cm_scaffold_27_3
unknown

Not on your lists

comp(1553..2266)
DNA (714bp) protein (238aa)

This feature has no annotations

2013_60cm_scaffold_27_4
Arthrobacter sp. Rue61a, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3781..4416
DNA (636bp) protein (212aa)
LuxR family transcriptional regulator n=1 Tax=Arthrobacter sp. AK-YN10 RepID=U1YVS7_9MICC
two-component system response regulator
Putative response regulator responding to cell wall stress/antimicrobial peptides {ECO:0000313|EMBL:AFR29547.1}; TaxID=1118963 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrob
2013_60cm_scaffold_27_5
unknown

Not on your lists

4587..4811
DNA (225bp) protein (75aa)

This feature has no annotations

2013_60cm_scaffold_27_6
unknown

Not on your lists

4902..6098
DNA (1197bp) protein (399aa)

This feature has no annotations

2013_60cm_scaffold_27_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

6088..6768
DNA (681bp) protein (227aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Signal peptidase I n=1 Tax=Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2) RepID=F2LVW5_HIPMA
signal peptidase I
2013_60cm_scaffold_27_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6853..10590
DNA (3738bp) protein (1246aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4K9_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG93751.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_27_9
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10656..11879
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MHR8_CORCM
Uncharacterized protein {ECO:0000313|EMBL:ETX03093.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
2013_60cm_scaffold_27_10
unknown

Not on your lists

12011..12235
DNA (225bp) protein (75aa)

This feature has no annotations

2013_60cm_scaffold_27_11
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(12777..13094)
DNA (318bp) protein (106aa)
ATPase AAA n=1 Tax=Synergistetes bacterium JGI 0000079-D21 RepID=UPI0003B72F3D
transposase IstB-like ATP-binding protein Tax=CG_Anaero_04
ISChy4, transposition helper protein
2013_60cm_scaffold_27_12
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

13490..13807
DNA (318bp) protein (106aa)
Integrase catalytic region n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TWA9_9CHLR
putative transposase
Integrase catalytic region {ECO:0000313|EMBL:EFH84492.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter ra
2013_60cm_scaffold_27_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

13833..14099
DNA (267bp) protein (89aa)
Integrase catalytic region {ECO:0000313|EMBL:AHG88076.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_27_14
Halomonas sp. BC04, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14204..14632
DNA (429bp) protein (143aa)
ISXoo16 transposase n=1 Tax=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) RepID=Q2P117_XANOM
Endonuclease DDE {ECO:0000313|EMBL:EWH03056.1}; TaxID=1403540 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. BC04.;"
ISXoo16 transposase
2013_60cm_scaffold_27_15
unknown

Not on your lists

comp(14795..15661)
DNA (867bp) protein (289aa)

This feature has no annotations

2013_60cm_scaffold_27_16
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

16567..17196
DNA (630bp) protein (210aa)
Two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4T1_GEMAT
two-component response regulator
Two-component response regulator {ECO:0000313|EMBL:BAH37241.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (
2013_60cm_scaffold_27_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(17201..18430)
DNA (1230bp) protein (410aa)
Amidohydrolase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02DB3_SOLUE
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:AHG88575.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_27_18
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18551..19015
DNA (465bp) protein (155aa)
Putative general secretion pathway protein G n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9E0_GEMAT
putative general secretion pathway protein G
Putative general secretion pathway protein G {ECO:0000313|EMBL:BAH39117.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas
2013_60cm_scaffold_27_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19022..20227
DNA (1206bp) protein (402aa)
Type II secretion system F domain protein n=1 Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C5G2_THEGP
Type II secretion system F domain-containing protein
Type II secretion system F domain-containing protein {ECO:0000313|EMBL:AHG91939.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_27_20
unknown

Not on your lists

20224..20661
DNA (438bp) protein (146aa)

This feature has no annotations

2013_60cm_scaffold_27_21
unknown

Not on your lists

20651..21046
DNA (396bp) protein (132aa)

This feature has no annotations

2013_60cm_scaffold_27_22
unknown

Not on your lists

21073..21675
DNA (603bp) protein (201aa)

This feature has no annotations

2013_60cm_scaffold_27_23
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21672..22622
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Marinobacterium rhizophilum RepID=UPI00037CE5DC
general secretion pathway protein K; K02460 general secretion pathway protein K Tax=CG_Hydro_01
general secretion pathway protein K
2013_60cm_scaffold_27_24
unknown

Not on your lists

comp(22558..23136)
DNA (579bp) protein (193aa)

This feature has no annotations

2013_60cm_scaffold_27_25
unknown

Not on your lists

23176..24528
DNA (1353bp) protein (451aa)

This feature has no annotations

2013_60cm_scaffold_27_26
unknown

Not on your lists

24525..25031
DNA (507bp) protein (169aa)

This feature has no annotations

2013_60cm_scaffold_27_27
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

25028..26569
DNA (1542bp) protein (514aa)
Putative general secretion pathway protein D n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7C5_GEMAT
gspD; putative general secretion pathway protein D precursor
Putative general secretion pathway protein D {ECO:0000313|EMBL:BAH38135.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas
2013_60cm_scaffold_27_28
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

26566..28053
DNA (1488bp) protein (496aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI000373D432
General secretion pathway protein E (Type II traffic warden ATPase) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
general secretion pathway protein E
2013_60cm_scaffold_27_29
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(28081..29349)
DNA (1269bp) protein (423aa)
MFS transporter n=1 Tax=Pseudomonas thermotolerans RepID=UPI0003645B08
kgtP; alpha-ketoglutarate permease
Alpha-ketoglutarate permease {ECO:0000313|EMBL:BAH38264.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (stra
2013_60cm_scaffold_27_30
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

29525..30658
DNA (1134bp) protein (378aa)
Sulfite dehydrogenase soxC n=1 Tax=uncultured marine bacterium Ant4D5 RepID=Q2PY06_9BACT
oxidoreductase molybdopterin binding protein
Oxidoreductase molybdopterin binding protein {ECO:0000313|EMBL:AHG89344.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying items 1-30 of 148 in total

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