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2013_60cm_scaffold_51

Search features with annotation key words

Displaying items 1-30 of 80 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2013_60cm_scaffold_51_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2..199
DNA (198bp) protein (66aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Glutamine synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4T4_GEMAT
glutamine synthetase, type I
2013_60cm_scaffold_51_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(181..1173)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABL2_GEMAT
Protein of unknown function DUF2233, periplasmic
Uncharacterized protein {ECO:0000313|EMBL:AHG92938.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_51_3
unknown

Not on your lists

comp(1170..2078)
DNA (909bp) protein (303aa)

This feature has no annotations

2013_60cm_scaffold_51_4
unknown

Not on your lists

2104..2625
DNA (522bp) protein (174aa)

This feature has no annotations

2013_60cm_scaffold_51_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2631..3863
DNA (1233bp) protein (411aa)
Outer membrane efflux protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HB96_ANADF
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:AHG93662.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_51_6
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3860..5251
DNA (1392bp) protein (464aa)
Putative Multidrug resistance protein mdtA (Multidrug transporter mdtA) n=1 Tax=mine drainage metagenome RepID=E6PLR0_9ZZZZ
Probable Co/Zn/Cd efflux system membrane fusion protein
Probable Co/Zn/Cd efflux system membrane fusion protein {ECO:0000313|EMBL:CDM25334.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellanie
2013_60cm_scaffold_51_7
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5284..8349
DNA (3066bp) protein (1022aa)
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family id=14623092 bin=bin5_DeltaP species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=CSP1_8_Deltaproteobacteria
acriflavin resistance protein
2013_60cm_scaffold_51_8
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8363..11464
DNA (3102bp) protein (1034aa)
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=CSP1_8_Deltaproteobacteria
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family id=14623092 bin=bin5_DeltaP species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
acriflavin resistance protein
2013_60cm_scaffold_51_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11478..12755)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EXL4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90556.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_51_10
unknown

Not on your lists

12756..13415
DNA (660bp) protein (220aa)

This feature has no annotations

2013_60cm_scaffold_51_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13557..15788)
DNA (2232bp) protein (744aa)
Glutamine synthetase type III n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4X6_GEMAT
Glutamine synthetase type III domain-containing protein rbh
Glutamine synthetase type III domain-containing protein {ECO:0000313|EMBL:AHG87975.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_51_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15907..17157)
DNA (1251bp) protein (417aa)
Major facilitator superfamily MFS_1 n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NW66_9BACT
protein of unknown function DUF894 DitE
Uncharacterized protein {ECO:0000313|EMBL:AHG89049.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_51_13
Burkholderia sp. lig30, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17154..17678)
DNA (525bp) protein (175aa)
membrane protein n=1 Tax=Burkholderia ubonensis RepID=UPI00016A31B2
Uncharacterized protein {ECO:0000313|EMBL:KDB06492.1}; Flags: Precursor;; TaxID=1192124 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source
hypothetical protein
2013_60cm_scaffold_51_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17853..18491
DNA (639bp) protein (213aa)
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG93808.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
RNA polymerase sigma factor, sigma-70 family protein id=3960152 bin=GWA2_Methylomirabilis_73_35 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
2013_60cm_scaffold_51_15
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

18488..19378
DNA (891bp) protein (297aa)
Putative transmembrane anti-sigma factor n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAA1_SPHTD
putative transmembrane anti-sigma factor
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:ACZ40744.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphae
2013_60cm_scaffold_51_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19400..19669)
DNA (270bp) protein (90aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6J9Y3_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88583.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_51_17
Nostoc punctiforme, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(19762..20595)
DNA (834bp) protein (278aa)
phosphoesterase n=1 Tax=Anabaena sp. PCC 7108 RepID=UPI00034DB8DE
phosphoesterase, PA-phosphatase related
Phosphoesterase, PA-phosphatase related {ECO:0000313|EMBL:ACC85289.1}; TaxID=63737 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc punctiforme (strain ATCC 29133 /
2013_60cm_scaffold_51_18
unknown

Not on your lists

20905..21339
DNA (435bp) protein (145aa)

This feature has no annotations

2013_60cm_scaffold_51_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

21680..22270
DNA (591bp) protein (197aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG89109.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_51_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

22429..24099
DNA (1671bp) protein (557aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A762_GEMAT
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AHG89111.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_51_21
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

24096..25148
DNA (1053bp) protein (351aa)
histidine kinase (EC:2.7.13.3) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Integral membrane sensor signal transduction histidine kinase id=3012333 bin=GWC2_Geobacteraceae_55_20 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
sensor histidine kinase
2013_60cm_scaffold_51_22
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

25410..25799
DNA (390bp) protein (130aa)
Putative pilin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9W7_GEMAT
putative pilin
Putative pilin {ECO:0000313|EMBL:BAH39565.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM
2013_60cm_scaffold_51_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(25867..30477)
DNA (4611bp) protein (1537aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9D2_GEMAT
protein of unknown function DUF490
Uncharacterized protein {ECO:0000313|EMBL:AHG89876.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_51_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(30477..32717)
DNA (2241bp) protein (747aa)
Outer membrane protein assembly factor BamA n=1 Tax=Nitratiruptor sp. (strain SB155-2) RepID=A6Q212_NITSB
surface antigen (D15)
Surface antigen (D15) {ECO:0000313|EMBL:AHG89875.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_51_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(32838..34313)
DNA (1476bp) protein (492aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
Adenosylhomocysteinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEG7_GEMAT
Adenosylhomocysteinase
2013_60cm_scaffold_51_26
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(34367..35311)
DNA (945bp) protein (315aa)
ArsR family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEG8_GEMAT
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Methyltransferase type 11
2013_60cm_scaffold_51_27
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(35373..36794)
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9I5_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39162.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
2013_60cm_scaffold_51_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(36956..38638)
DNA (1683bp) protein (561aa)
glgA; glycogen synthase (EC:2.4.1.21); K00703 starch synthase [EC:2.4.1.21] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
glgA; glycogen synthase (EC:2.4.1.21)
Glycogen synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A847_GEMAT
2013_60cm_scaffold_51_29
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

38896..40521
DNA (1626bp) protein (542aa)
TldD/PmbA family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3I3_GEMAT
TldD/PmbA family protein
TldD/PmbA family protein {ECO:0000313|EMBL:BAH37060.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T
2013_60cm_scaffold_51_30
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

40518..41903
DNA (1386bp) protein (462aa)
TldD/PmbA family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3I4_GEMAT
TldD/PmbA family protein
TldD/PmbA family protein {ECO:0000313|EMBL:BAH37061.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T
Displaying items 1-30 of 80 in total

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