name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
berkeley_reactor_200306_biofilm_scaffold_5264_1
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
3..179
|
Metallophosphoesterase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W736_DYAFD
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ACT92645.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_5264_2
unknown
|
Not on your lists |
comp(241..1059)
|
This feature has no annotations |
|
berkeley_reactor_200306_biofilm_scaffold_5264_3
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(1168..1824)
|
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003763C39
Thioredoxin {ECO:0000313|EMBL:KIC96424.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
thioredoxin
|
|
berkeley_reactor_200306_biofilm_scaffold_5264_4
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
2045..2344
|
RNP-1 like RNA-binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG92_NIAKG
RNA-binding protein {ECO:0000313|EMBL:KIC96483.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
RNP-1 like RNA-binding protein
|
|
berkeley_reactor_200306_biofilm_scaffold_5264_5
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(2452..3177)
|
xylose isomerase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003805E13
xylose isomerase
Xylose isomerase {ECO:0000313|EMBL:AKD55641.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
|
|
berkeley_reactor_200306_biofilm_scaffold_5264_6
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(3401..3790)
|
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003708741
Uncharacterized protein {ECO:0000313|EMBL:KIC91003.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_5264_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
4120..4734
|
Electron transport protein SCO1/SenC n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCI9_NIAKG
electron transport protein SCO1/SenC
Electron transport protein SCO1/SenC {ECO:0000313|EMBL:AEW02529.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_5264_8
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
4842..5258
|
Ferric uptake regulator, Fur family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCI8_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO42237.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
ferric uptake regulator family protein
|
|
berkeley_reactor_200306_biofilm_scaffold_5264_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
5277..6299
|
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Holliday junction DNA helicase RuvB n=1 Tax=Niabella aurantiaca RepID=UPI0003651079
Holliday junction DNA helicase subunit RuvB
|
|
berkeley_reactor_200306_biofilm_scaffold_5264_10
unknown
|
Not on your lists |
comp(6463..6771)
|
This feature has no annotations |
|
berkeley_reactor_200306_biofilm_scaffold_5264_11
CG_Arma_01, Armatimonadetes, Bacteria
|
Not on your lists |
6890..8455
|
beta-fructosidase, family GH32 (EC:3.2.1.26)
Glycosyl hydrolase family 32 domain protein id=4124041 bin=GWC2_Clostridiales_40_7 species=Haladaptatus paucihalophilus genus=Haladaptatus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
Tax=CG_Arma_01
|
|
berkeley_reactor_200306_biofilm_scaffold_5264_12
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(8457..10361)
|
AAA ATPase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PGH0_CHIPD
ATPase AAA
AAA ATPase {ECO:0000313|EMBL:ACU59902.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_5264_13
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(10840..11430)
|
Cytochrome c n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KXX5_SOLCM
Putative cytochrome c {ECO:0000313|EMBL:GAO44635.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
cytochrome C
|
|
berkeley_reactor_200306_biofilm_scaffold_5264_14
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(11463..12392)
|
NmrA-like family domain containing 1 n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KZW4_HALH1
NmrA-like family domain-containing 1
NmrA-like family domain containing 1 {ECO:0000313|EMBL:AEE51534.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_5264_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(12619..14127)
|
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI80_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00697.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_5264_16
unknown
|
Not on your lists |
14275..14367
|
This feature has no annotations |
|
berkeley_reactor_200306_biofilm_scaffold_5264_17
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
14549..16987
|
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y774_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ28693.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_5264_18
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
16962..18200
|
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y775_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:GAO44847.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_5264_19
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
18197..18502
|
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PK46_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU58387.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_5264_20
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
18801..19070
|
Histone family protein DNA-binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7J5_NIAKG
DNA-binding protein HU-beta {ECO:0000313|EMBL:GAO41975.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
histone family protein DNA-binding protein
|
|
berkeley_reactor_200306_biofilm_scaffold_5264_21
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
19169..19276
|
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PK44_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU58385.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_5264_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(19429..20118)
|
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Pyridoxine/pyridoxamine 5'-phosphate oxidase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7J7_NIAKG
Pyridoxamine 5'-phosphate oxidase
|
|
berkeley_reactor_200306_biofilm_scaffold_5264_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
20161..23025
|
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000381B7CB
SNF2-related protein
SNF2-related protein {ECO:0000313|EMBL:AEV99852.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_5264_24
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(23133..26312)
|
AsmA family protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KXQ8_SOLCM
AsmA family protein
AsmA family protein {ECO:0000313|EMBL:AFD05473.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_5264_25
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
26631..27398
|
exodeoxyribonuclease III n=1 Tax=Niabella aurantiaca RepID=UPI00036C7AB3
Exodeoxyribonuclease III {ECO:0000313|EMBL:KIC96156.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
exodeoxyribonuclease III
|
|
berkeley_reactor_200306_biofilm_scaffold_5264_26
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(27524..28297)
|
Cellulase n=1 Tax=Niabella soli DSM 19437 RepID=H1NV13_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF16298.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
|
|
berkeley_reactor_200306_biofilm_scaffold_5264_27
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(29029..30708)
|
RagB/SusD domain-containing protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EE64_RUNSL
RagB/SusD domain-containing protein
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AEI48880.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_5264_28
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(30721..33708)
|
TonB-dependent receptor plug n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2ERZ0_EMTOG
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AFK02443.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_5264_29
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(33970..36120)
|
Planctomycete cytochrome C n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VW67_DYAFD
cytochrome C
Planctomycete cytochrome C {ECO:0000313|EMBL:ACT93199.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_5264_30
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(36142..37596)
|
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VW68_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT93200.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
|