name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
berkeley_reactor_200306_biofilm_scaffold_71385_1
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(1..459)
|
Metallophosphoesterase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W736_DYAFD
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ACT92645.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_71385_2
unknown
|
Not on your lists |
605..1099
|
This feature has no annotations |
|
berkeley_reactor_200306_biofilm_scaffold_71385_3
Algibacter lectus, Algibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(1215..2972)
|
hypothetical protein n=1 Tax=Flavobacteriaceae bacterium S85 RepID=UPI0002559D74
Uncharacterized protein {ECO:0000313|EMBL:GAL64863.1}; TaxID=221126 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Algibacter.;" source="Algibacter lectus.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_71385_4 |
Not on your lists |
comp(2985..6581)
|
TonB-dependent receptor plug n=1 Tax=Flavobacteriaceae bacterium S85 RepID=UPI0002559D75
Uncharacterized protein {ECO:0000313|EMBL:KKN98260.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
TonB-dependent receptor plug
|
|
berkeley_reactor_200306_biofilm_scaffold_71385_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(6769..7953)
|
Anti-FecI sigma factor, FecR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TM28_NIAKG
anti-FecI sigma factor FecR
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:AEV99801.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
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berkeley_reactor_200306_biofilm_scaffold_71385_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(8050..8646)
|
RNA polymerase sigma factor n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7R3_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_71385_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
8841..9470
|
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNV6_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02041.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_71385_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
9651..10676
|
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000367028E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02042.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
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berkeley_reactor_200306_biofilm_scaffold_71385_9
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
10745..11812
|
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|SAAS:SAAS00182444};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036FB96E
phosphoserine aminotransferase apoenzyme
|
|
berkeley_reactor_200306_biofilm_scaffold_71385_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
11835..13061
|
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036500A7
hypothetical protein
Uncharacterized conserved protein UCP033563 {ECO:0000313|EMBL:AEW02044.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_71385_11
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
13102..13395
|
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI0003710689
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB36597.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_71385_12
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
13350..13979
|
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QFB9_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD56835.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
|
|
berkeley_reactor_200306_biofilm_scaffold_71385_13
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(14239..14970)
|
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000368716E
methyltransferase type 11
Methyltransferase type 11 {ECO:0000313|EMBL:AKD03670.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
|
|
berkeley_reactor_200306_biofilm_scaffold_71385_14
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(15131..18211)
|
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036D769D
dehydrogenase
Dehydrogenase {ECO:0000313|EMBL:AKD57696.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
|
|
berkeley_reactor_200306_biofilm_scaffold_71385_15
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
18845..20494
|
ABC transporter related n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PL22_CHIPD
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACU63932.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_71385_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
20641..21414
|
Lysozyme {ECO:0000313|EMBL:AEW02471.1}; EC=3.2.1.17 {ECO:0000313|EMBL:AEW02471.1};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Lysozyme n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB88_NIAKG
lysozyme
|
|
berkeley_reactor_200306_biofilm_scaffold_71385_17
unknown
|
Not on your lists |
21431..21655
|
This feature has no annotations |
|
berkeley_reactor_200306_biofilm_scaffold_71385_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(22152..23183)
|
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP44_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03162.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_71385_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
23310..24347
|
radical SAM protein n=1 Tax=Segetibacter koreensis RepID=UPI000363E614
radical SAM protein
Radical SAM domain protein {ECO:0000313|EMBL:AEW02470.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_71385_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
24526..25140
|
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGA1_NIAKG
Sua5/YciO/YrdC/YwlC family protein
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:AEW02740.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_71385_21
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(25260..26441)
|
Membrane dipeptidase n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FHK0_9BACT
Putative dipeptidase {ECO:0000313|EMBL:GAO42198.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
dipeptidase
|
|
berkeley_reactor_200306_biofilm_scaffold_71385_22
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(26582..27127)
|
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF65_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC96453.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_71385_23
unknown
|
Not on your lists |
27480..27653
|
This feature has no annotations |
|
berkeley_reactor_200306_biofilm_scaffold_71385_24
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
27788..29032
|
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XUH4_PEDHD
3-oxoacyl-ACP synthase
|
|
berkeley_reactor_200306_biofilm_scaffold_71385_trna_1
unknown
|
Not on your lists |
29191..29263
|
transferRNA Phe
|
|
berkeley_reactor_200306_biofilm_scaffold_71385_25
unknown
|
Not on your lists |
comp(29535..29774)
|
This feature has no annotations |
|
berkeley_reactor_200306_biofilm_scaffold_71385_26
unknown
|
Not on your lists |
comp(29807..30574)
|
This feature has no annotations |
|
berkeley_reactor_200306_biofilm_scaffold_71385_27
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria
|
Not on your lists |
30937..32049
|
Filamentation induced by cAMP protein Fic n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BXM4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KHE93870.1}; TaxID=237368 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="Candidatus Scalindua brodae.;"
filamentation induced by cAMP protein fic
|
|
berkeley_reactor_200306_biofilm_scaffold_71385_28
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(32480..33724)
|
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SRA3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU28707.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_71385_29
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(33760..34275)
|
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SQ18_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU28706.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
|