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berkeley_reactor_200306_biofilm_scaffold_42279

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_biofilm_scaffold_42279_1
unknown

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287..880
DNA (594bp) protein (198aa)

This feature has no annotations

berkeley_reactor_200306_biofilm_scaffold_42279_2
unknown

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1428..2036
DNA (609bp) protein (203aa)

This feature has no annotations

berkeley_reactor_200306_biofilm_scaffold_42279_3
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2184..2780
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KV82_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD06140.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
berkeley_reactor_200306_biofilm_scaffold_42279_4
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2923..5013
DNA (2091bp) protein (697aa)
RHS repeat-associated core domain protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VQG1_9SPHI
RHS repeat-associated core domain protein {ECO:0000313|EMBL:EFK56012.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
RHS repeat-associated core domain-containing protein
berkeley_reactor_200306_biofilm_scaffold_42279_5
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5010..5408
DNA (399bp) protein (133aa)
Contig52, whole genome shotgun sequence {ECO:0000313|EMBL:KIO76862.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
berkeley_reactor_200306_biofilm_scaffold_42279_6
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5405..5824
DNA (420bp) protein (140aa)
Uncharacterized protein {ECO:0000313|EMBL:GAK38139.1}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides graminisolvens DSM 19988 = JCM 15093.;"
berkeley_reactor_200306_biofilm_scaffold_42279_7
Flavobacterium indicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(5852..6154)
DNA (303bp) protein (101aa)
Probable transcriptional regulator, XRE family n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XST7_FLAIG
transcriptional regulator, XRE family
Probable transcriptional regulator, XRE family {ECO:0000313|EMBL:CCG53479.1}; TaxID=1094466 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9).;"
berkeley_reactor_200306_biofilm_scaffold_42279_8
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6188..7609
DNA (1422bp) protein (474aa)
RHS repeat-associated core domain protein containing protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CJA0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIA92321.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
RHS repeat-associated core domain-containing protein
berkeley_reactor_200306_biofilm_scaffold_42279_9
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7613..8023
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2JXK1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJL72585.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
hypothetical protein
berkeley_reactor_200306_biofilm_scaffold_42279_10
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8055..8324
DNA (270bp) protein (90aa)
RHS repeat-associated core domain protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KV67_SOLCM
RHS repeat-associated core domain-containing protein
RHS repeat-associated core domain protein {ECO:0000313|EMBL:AFD06125.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
Displaying 10 items

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