name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
berkeley_reactor_200306_biofilm_scaffold_37162_1
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(3..1313)
|
Copper-exporting ATPase {ECO:0000313|EMBL:EFK35882.1}; EC=3.6.3.4 {ECO:0000313|EMBL:EFK35882.1};; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
copper-translocating P-type ATPase (EC:3.6.3.4)
Copper-exporting ATPase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8X1_9FLAO
|
|
berkeley_reactor_200306_biofilm_scaffold_37162_2
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(1402..1965)
|
Transcriptional regulator, AraC family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8X2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:GAE64129.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
AraC family transcriptional regulator
|
|
berkeley_reactor_200306_biofilm_scaffold_37162_3
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(2081..2905)
|
RteC protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8X3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:GAE64130.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
Tetracycline regulation of excision, RteC
|
|
berkeley_reactor_200306_biofilm_scaffold_37162_4
unknown
|
Not on your lists |
comp(3040..3240)
|
This feature has no annotations |
|
berkeley_reactor_200306_biofilm_scaffold_37162_5
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(3275..5320)
|
Cadmium-exporting ATPase {ECO:0000313|EMBL:EFK35885.1}; EC=3.6.3.3 {ECO:0000313|EMBL:EFK35885.1};; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
ATPase P (EC:3.6.3.5)
Cadmium-exporting ATPase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8X4_9FLAO
|
|
berkeley_reactor_200306_biofilm_scaffold_37162_6
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(5338..6618)
|
Efflux transporter, RND family, MFP subunit n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8X5_9FLAO
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EFK35886.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
RND family efflux transporter MFP subunit
|
|
berkeley_reactor_200306_biofilm_scaffold_37162_7
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(6626..10993)
|
Heavy metal efflux pump, CzcA family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8X6_9FLAO
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:EFK35887.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
heavy metal efflux pump
|
|
berkeley_reactor_200306_biofilm_scaffold_37162_8
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(11526..11885)
|
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8X8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:GAE64135.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
Zinc uptake regulation protein ZUR
|
|
berkeley_reactor_200306_biofilm_scaffold_37162_9
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(11943..12281)
|
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8X9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:GAE64136.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_37162_10
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(12351..12560)
|
Uncharacterized protein n=2 Tax=Sphingobacterium spiritivorum RepID=C2FXA1_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EKF53818.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_37162_11
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(12560..13162)
|
Heavy metal-associated domain protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G218_9SPHI
putative copper-transporting ATPase
Putative copper-transporting ATPase {ECO:0000313|EMBL:AIL45310.1}; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis NUHP1.;"
|
|
berkeley_reactor_200306_biofilm_scaffold_37162_12
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(13159..13533)
|
ArsR family transcriptional regulator n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S1C7_9FLAO
Arsenical resistance operon repressor
Arsenical resistance operon repressor {ECO:0000313|EMBL:AIL45311.1}; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis NUHP1.;"
|
|
berkeley_reactor_200306_biofilm_scaffold_37162_13
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(13630..15630)
|
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S636_PEDSD
Uncharacterized protein {ECO:0000313|EMBL:GAE64139.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_37162_14
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(15732..17018)
|
Relaxase/mobilization nuclease domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VZX4_9FLAO
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EFK33904.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
relaxase/mobilization nuclease family protein
|
|
berkeley_reactor_200306_biofilm_scaffold_37162_15
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(17026..17457)
|
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VZX5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EFK33905.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
uncharacterized protein
|
|
berkeley_reactor_200306_biofilm_scaffold_37162_16
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
18210..18977
|
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0M8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:GAE64142.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
chromosome partitioning ATPase
|
|
berkeley_reactor_200306_biofilm_scaffold_37162_17
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
18982..19431
|
Uncharacterized protein n=2 Tax=Sphingobacteriaceae RepID=F0S628_PEDSD
Uncharacterized protein {ECO:0000313|EMBL:GAE64143.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_37162_18
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
19443..20078
|
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0N0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:GAE64144.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_37162_19
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(20095..20907)
|
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S624_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY52127.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_37162_20
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(20908..22683)
|
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S623_PEDSD
Uncharacterized protein {ECO:0000313|EMBL:ADY52126.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_37162_21
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(22673..22963)
|
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S622_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY52125.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_37162_22
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(22966..23856)
|
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S621_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY52124.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_37162_23
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(23864..24079)
|
Helix-turn-helix domain protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S620_PEDSD
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ADY52123.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_37162_24
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
24337..24642
|
Uncharacterized protein n=3 Tax=Bacteroidetes RepID=F0S619_PEDSD
hypothetical protein
Conjugative transposon protein TraE {ECO:0000313|EMBL:EFK56940.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
|
|
berkeley_reactor_200306_biofilm_scaffold_37162_25
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
24654..24983
|
Conjugative transposon protein TraF n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0N8_9FLAO
Conjugative transposon protein TraF {ECO:0000313|EMBL:EFK34037.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
conjugal transfer protein TraF
|
|
berkeley_reactor_200306_biofilm_scaffold_37162_26
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
24980..27484
|
Type IV secretory pathway VirB4 components-like protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S617_PEDSD
Type IV secretory pathway VirB4 components-like protein {ECO:0000313|EMBL:ADY52120.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
type IV secretory pathway VirB4 components-like protein
|
|
berkeley_reactor_200306_biofilm_scaffold_37162_27
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
27513..28145
|
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VNM0_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:GAE64154.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_37162_28
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
28149..29144
|
Conjugative transposon TraJ protein n=2 Tax=Bacteroidetes RepID=C2G248_9SPHI
Bacteroides conjugative transposon TraJ protein {ECO:0000313|EMBL:CDT25314.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
TraJ family protein conjugative transposon
|
|
berkeley_reactor_200306_biofilm_scaffold_37162_29
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
29165..29788
|
Conjugative transposon TraK protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FRZ1_9SPHI
Conjugative transposon TraK protein {ECO:0000313|EMBL:EEI94356.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_37162_30
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
29801..30229
|
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S613_PEDSD
Uncharacterized protein {ECO:0000313|EMBL:GAE64157.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
hypothetical protein
|