name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
berkeley_reactor_200306_biofilm_scaffold_47405_1
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
422..1657
|
RHS repeat-associated core domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDE1_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC91307.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
RHS repeat-associated core domain-containing protein
|
|
berkeley_reactor_200306_biofilm_scaffold_47405_2
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
1680..2231
|
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMU2_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU60376.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
|
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berkeley_reactor_200306_biofilm_scaffold_47405_3
Tannerella sp. CAG:51, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
2557..3084
|
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:51 RepID=R7DGE3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD89038.1}; TaxID=1262979 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:51.;"
|
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berkeley_reactor_200306_biofilm_scaffold_47405_4
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(3128..3448)
|
hypothetical protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI000380A2A6
Uncharacterized protein {ECO:0000313|EMBL:ELR68283.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
XRE family transcriptional regulator
|
|
berkeley_reactor_200306_biofilm_scaffold_47405_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(3807..5804)
|
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000379CAAA
Uncharacterized protein {ECO:0000313|EMBL:AHF16813.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_47405_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(5823..8981)
|
TonB-dependent receptor plug n=1 Tax=Niabella soli DSM 19437 RepID=H1NTM8_9SPHI
TonB-linked outer membrane protein
TonB-linked outer membrane protein {ECO:0000313|EMBL:AHF16812.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
|
|
berkeley_reactor_200306_biofilm_scaffold_47405_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(9004..9753)
|
Transcriptional regulator, DeoR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8M4_NIAKG
DeoR family transcriptional regulator
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:AEW00196.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
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berkeley_reactor_200306_biofilm_scaffold_47405_8
unknown
|
Not on your lists |
comp(9969..10580)
|
This feature has no annotations |
|
berkeley_reactor_200306_biofilm_scaffold_47405_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
10808..13291
|
MscS Mechanosensitive ion channel n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFM3_NIAKG
mechanosensitive ion channel MscS
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:AEV99462.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_47405_10
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
13398..14558
|
Calcium/proton antiporter n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11TL9_CYTH3
Ionic transporter y4hA {ECO:0000313|EMBL:KIA82578.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
chaA; calcium/proton antiporter
|
|
berkeley_reactor_200306_biofilm_scaffold_47405_11
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
14682..15581
|
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037F7928
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17986.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
|
|
berkeley_reactor_200306_biofilm_scaffold_47405_12
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
15809..16258
|
Transcriptional regulator, MarR family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W1U4_9FLAO
MarR family transcriptional regulator {ECO:0000313|EMBL:KFF11003.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
marR2; MarR family transcriptional regulator
|
|
berkeley_reactor_200306_biofilm_scaffold_47405_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
16259..17839
|
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6W1_NIAKG
EmrB/QacA subfamily drug resistance transporter
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:AEV97964.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_47405_14
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
18146..18715
|
RNA polymerase sigma-70 factor n=2 Tax=Sphingobacterium spiritivorum RepID=C2FTN4_9SPHI
RNA polymerase {ECO:0000313|EMBL:KIA96510.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
RNA polymerase sigma-70 factor
|
|
berkeley_reactor_200306_biofilm_scaffold_47405_15
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
18847..19869
|
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HU70_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ59037.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
anti-feci sigma factor, fecr
|
|
berkeley_reactor_200306_biofilm_scaffold_47405_16
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
20019..23447
|
TonB-dependent receptor n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J419_CYCMS
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AEL26685.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_47405_17
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
23458..25137
|
Putative nutrient binding outer membrane protein n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7WKQ9_9BACT
Putative nutrient binding outer membrane protein {ECO:0000313|EMBL:EPR67299.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
RagB/SusD domain-containing protein
|
|
berkeley_reactor_200306_biofilm_scaffold_47405_18
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
25355..27550
|
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037F6E05
xylan esterase
Tax=RBG_13_Bacteroidetes_42_15_curated
|
|
berkeley_reactor_200306_biofilm_scaffold_47405_19
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
27596..29797
|
Xylan esterase id=4252902 bin=GWC2_Bacteroidetes_40_22 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
xylan esterase
Tax=RBG_13_Bacteroidetes_42_15_curated
|
|
berkeley_reactor_200306_biofilm_scaffold_47405_20
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
29869..31434
|
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035EAE33
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK02382.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_47405_21
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
31506..32879
|
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003624BDC
oxidoreductase domain-containing protein
Tax=GWA2_Bacteroidetes_40_15_curated
|
|
berkeley_reactor_200306_biofilm_scaffold_47405_22
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
32969..34159
|
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000366EF21
hypothetical protein
Tax=GWE2_Bacteroidetes_42_39_curated
|
|
berkeley_reactor_200306_biofilm_scaffold_47405_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
34277..35575
|
FolC bifunctional protein {ECO:0000313|EMBL:AEV98442.1}; EC=6.3.2.17 {ECO:0000313|EMBL:AEV98442.1};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
FolC bifunctional protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFL1_NIAKG
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
|
|
berkeley_reactor_200306_biofilm_scaffold_47405_24
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
36081..36965
|
Fructosamine kinase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PTL2_CHIPD
fructosamine kinase
Fructosamine kinase {ECO:0000313|EMBL:ACU62769.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_47405_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(37021..37407)
|
Nuclear protein SET n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPC7_NIAKG
nuclear protein SET
Nuclear protein SET {ECO:0000313|EMBL:AEV96733.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_47405_26
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
37495..38886
|
Magnesium transporter n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPC6_NIAKG
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
magnesium transporter
|
|
berkeley_reactor_200306_biofilm_scaffold_47405_27
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
39300..40670
|
alpha-L-fucosidase n=1 Tax=Segetibacter koreensis RepID=UPI0003713148
Alpha-L-fucosidase {ECO:0000313|EMBL:KIA96393.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
alpha-L-fucosidase
|
|
berkeley_reactor_200306_biofilm_scaffold_47405_28
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
40676..42643
|
Alpha-L-fucosidase {ECO:0000313|EMBL:ADZ77236.1}; EC=3.2.1.51 {ECO:0000313|EMBL:ADZ77236.1};; Flags: Precursor;; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
Alpha-L-fucosidase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C9U6_SPHS2
alpha-L-fucosidase
|
|
berkeley_reactor_200306_biofilm_scaffold_47405_29
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(42725..45775)
|
AsmA family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ39_NIAKG
AsmA family protein
AsmA family protein {ECO:0000313|EMBL:AEV97556.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_47405_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
45852..46463
|
tRNA guanosine-2'-O-methyltransferase {ECO:0000313|EMBL:AEV97557.1}; EC=2.1.1.34 {ECO:0000313|EMBL:AEV97557.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
tRNA guanosine-2'-O-methyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ40_NIAKG
tRNA guanosine-2'-O-methyltransferase
|