name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
berkeley_reactor_200306_biofilm_scaffold_124345_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
2..370
|
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NMF6_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF14482.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
|
|
berkeley_reactor_200306_biofilm_scaffold_124345_2
Nonlabens dokdonensis, Nonlabens, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
684..1349
|
Phenylacrylic acid decarboxylase n=1 Tax=Nonlabens dokdonensis (strain DSM 17205 / KCTC 12402 / DSW-6) RepID=L7W739_NONDD
phenylacrylic acid decarboxylase
Phenylacrylic acid decarboxylase {ECO:0000313|EMBL:AGC76012.1}; TaxID=592029 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Nonlabens.;" source="Nonlabens dokdonensis (strain DSM 17205 / KCTC 12402 / DSW-6); (Donghaeana dokdonensis).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_124345_3
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
1410..2639
|
Putative uncharacterized protein n=1 Tax=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) RepID=C0Z7Q5_BREBN
5'-Nucleotidase domain protein {ECO:0000313|EMBL:CDJ99973.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_124345_4
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(2647..4326)
|
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003633774
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:AFK01606.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_124345_5
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(4343..5377)
|
Oxidoreductase domain protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QTP1_SPILD
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ADB42173.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_124345_6
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(5419..6456)
|
oxidoreductase n=1 Tax=Spirosoma spitsbergense RepID=UPI00037EE915
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:AKD58609.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
|
|
berkeley_reactor_200306_biofilm_scaffold_124345_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(6574..7761)
|
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y6P0_9SPHI
Copper amine oxidase {ECO:0000313|EMBL:KIC94070.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_124345_8
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(7766..9103)
|
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDM2_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC94064.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_124345_9
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(9113..10774)
|
Putative uncharacterized protein n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UN94_TANFA
Uncharacterized protein {ECO:0000313|EMBL:BAR49899.1}; TaxID=1307832 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia 3313.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_124345_10
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(10796..12442)
|
SusD family protein n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UN93_TANFA
SusD family protein
SusD family protein {ECO:0000313|EMBL:BAR49898.1}; TaxID=1307832 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia 3313.;"
|
|
berkeley_reactor_200306_biofilm_scaffold_124345_11
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(12467..15913)
|
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UN92_TANFA
TonB-linked outer membrane protein, SusC/RagA family
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:AEW20622.1}; TaxID=203275 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338); (Bacteroides forsythus).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_124345_12
unknown
|
Not on your lists |
15954..16139
|
This feature has no annotations |
|
berkeley_reactor_200306_biofilm_scaffold_124345_13
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(16059..17294)
|
Anti-FecI sigma factor, FecR n=1 Tax=Niabella soli DSM 19437 RepID=H1NM03_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIC95908.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_124345_14
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(17359..17949)
|
RNA polymerase, sigma-24 subunit, ECF subfamily id=3597302 bin=GWF2_Bacteroidetes_49_14 species=Dyadobacter fermentans genus=Dyadobacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
ECF subfamily RNA polymerase sigma-24 subunit
Tax=GWF2_Bacteroidetes_49_14_curated
|
|
berkeley_reactor_200306_biofilm_scaffold_124345_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(17984..19882)
|
Glucosamine-6-phosphate deaminase {ECO:0000313|EMBL:AEW00243.1}; EC=3.5.99.6 {ECO:0000313|EMBL:AEW00243.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Glucosamine-6-phosphate deaminase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9Q0_NIAKG
glucosamine-6-phosphate deaminase
|
|
berkeley_reactor_200306_biofilm_scaffold_124345_16
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria
|
Not on your lists |
comp(19899..22028)
|
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035FCA2A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV83060.1}; Flags: Precursor;; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_124345_17
Bacteroides intestinalis CAG:315, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(22048..23472)
|
Uncharacterized protein n=1 Tax=Bacteroides intestinalis CAG:315 RepID=R7DZL7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD96099.1}; TaxID=1263048 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides intestinalis CAG:315.;"
arabinose-proton symporter
|
|
berkeley_reactor_200306_biofilm_scaffold_124345_18
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(23503..24507)
|
Fatty acid elongase 3-ketoacyl-CoA synthase 1 n=5 Tax=Parabacteroides RepID=C7X905_9PORP
integral membrane protein
Putative integral membrane protein {ECO:0000313|EMBL:CDB49057.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
|
|
berkeley_reactor_200306_biofilm_scaffold_124345_19
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(24517..25455)
|
Ribokinase {ECO:0000313|EMBL:EEU51681.1}; EC=2.7.1.15 {ECO:0000313|EMBL:EEU51681.1};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Ribokinase n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B870_9PORP
ribokinase
|
|
berkeley_reactor_200306_biofilm_scaffold_124345_20
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(25480..28407)
|
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9I9L3_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS10065.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
coagulation factor 5/8 type domain protein
|
|
berkeley_reactor_200306_biofilm_scaffold_124345_21
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(28430..29830)
|
sialate O-acetylesterase (EC:3.1.1.53)
Sialate O-acetylesterase {ECO:0000313|EMBL:ADQ79958.1}; EC=3.1.1.53 {ECO:0000313|EMBL:ADQ79958.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Sialate O-acetylesterase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5G4_PALPW
|
|
berkeley_reactor_200306_biofilm_scaffold_124345_22
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(29827..30891)
|
Uncharacterized protein id=2140722 bin=GWE2_Bacteroidetes_42_39 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
Tax=GWE2_Bacteroidetes_42_39_curated
|
|
berkeley_reactor_200306_biofilm_scaffold_124345_23
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(30908..32881)
|
Putative uncharacterized protein id=4007839 bin=GWF2_Bacteroidetes_42_66 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
alpha-galactosidase
Tax=GWE2_Bacteroidetes_42_39_curated
|
|
berkeley_reactor_200306_biofilm_scaffold_124345_24
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(32891..34525)
|
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002DC66A6
RagB/SusD domain-containing protein
RagB/SusD domain protein {ECO:0000313|EMBL:ADY53517.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_124345_25
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(34544..37690)
|
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002F53F05
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ADY53518.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_124345_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(37815..39011)
|
N-acylglucosamine 2-epimerase {ECO:0000313|EMBL:AEW01477.1}; EC=5.1.3.8 {ECO:0000313|EMBL:AEW01477.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
N-acylglucosamine 2-epimerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDM7_NIAKG
N-acylglucosamine 2-epimerase
|
|
berkeley_reactor_200306_biofilm_scaffold_124345_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
39170..40393
|
Glucokinase {ECO:0000313|EMBL:AEW01478.1}; EC=2.7.1.2 {ECO:0000313|EMBL:AEW01478.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Glucokinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDM8_NIAKG
glucokinase
|
|
berkeley_reactor_200306_biofilm_scaffold_124345_28
unknown
|
Not on your lists |
40651..41409
|
This feature has no annotations |
|
berkeley_reactor_200306_biofilm_scaffold_124345_29
unknown
|
Not on your lists |
41414..42013
|
This feature has no annotations |
|
berkeley_reactor_200306_biofilm_scaffold_124345_30
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
42360..43382
|
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NM55_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17282.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
|