name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
berkeley_reactor_200306_biofilm_scaffold_9141_1
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria
|
Not on your lists |
comp(1..255)
|
Transcriptional regulator with HTH domain and aminotransferase domain n=2 Tax=Singulisphaera acidiphila RepID=L0DHS6_SINAD
transcriptional regulator with HTH domain and aminotransferase domain
Transcriptional regulator with HTH domain and aminotransferase domain {ECO:0000313|EMBL:AGA28919.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
|
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berkeley_reactor_200306_biofilm_scaffold_9141_2
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
338..802
|
rhodanese n=1 Tax=Enterobacteriaceae bacterium LSJC7 RepID=UPI00036323C6
Rhodanese domain containing protein
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
|
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berkeley_reactor_200306_biofilm_scaffold_9141_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria
|
Not on your lists |
792..1730
|
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJT0_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF42870.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_9141_4
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria
|
Not on your lists |
comp(1688..4906)
|
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI00037334EA
periplasmic protease
Tax=BJP_IG2102_Bacteroidetes_40_9
|
|
berkeley_reactor_200306_biofilm_scaffold_9141_5
unknown
|
Not on your lists |
5186..5590
|
This feature has no annotations |
|
berkeley_reactor_200306_biofilm_scaffold_9141_6
unknown
|
Not on your lists |
5947..6369
|
This feature has no annotations |
|
berkeley_reactor_200306_biofilm_scaffold_9141_7
unknown
|
Not on your lists |
comp(6403..6771)
|
This feature has no annotations |
|
berkeley_reactor_200306_biofilm_scaffold_9141_8
Gilliamella apicola, Gilliamella, Orbales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6796..8139)
|
Uncharacterized protein n=1 Tax=Cetobacterium somerae ATCC BAA-474 RepID=U7V9J2_9FUSO
putative multiple inositol polyphosphate histidine phosphatase 1
Histidine acid phosphatase {ECO:0000313|EMBL:KES16438.1}; TaxID=1445512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Orbales; Orbaceae; Gilliamella.;" source="Gilliamella apicola SCGC AB-598-P17.;"
|
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berkeley_reactor_200306_biofilm_scaffold_9141_9
Prevotella sp. CAG:924, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(8146..9756)
|
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:924 RepID=R5F9E0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCY01493.1}; TaxID=1262938 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:924.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_9141_10
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(9771..12572)
|
TonB-dependent receptor plug n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GML1_9BACT
TonB-dependent receptor plug {ECO:0000313|EMBL:CCH55139.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
TonB-dependent receptor
|
|
berkeley_reactor_200306_biofilm_scaffold_9141_11
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(12781..14430)
|
TPR repeat-containing protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMI7_CHIPD
hypothetical protein
TPR repeat-containing protein {ECO:0000313|EMBL:ACU58531.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_9141_12
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
14512..15297
|
ABC transporter n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B6E09E
Uncharacterized protein {ECO:0000313|EMBL:KIA96134.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
nodI; Nodulation ATP-binding protein I
|
|
berkeley_reactor_200306_biofilm_scaffold_9141_13
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
15319..16071
|
hypothetical protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B369E8
Uncharacterized protein {ECO:0000313|EMBL:KIA96133.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
ABC transporter permease
|
|
berkeley_reactor_200306_biofilm_scaffold_9141_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(16073..18190)
|
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKM2_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98696.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_9141_15
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(18233..20599)
|
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035EF12E
Putative ABC transporter permease protein {ECO:0000313|EMBL:GAO44886.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
antimicrobial peptide ABC transporter permease
|
|
berkeley_reactor_200306_biofilm_scaffold_9141_16
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(20657..22588)
|
Gamma-glutamyltransferase {ECO:0000313|EMBL:ACU58803.1}; EC=2.3.2.2 {ECO:0000313|EMBL:ACU58803.1};; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Gamma-glutamyltransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQB4_CHIPD
gamma-glutamyltransferase
|
|
berkeley_reactor_200306_biofilm_scaffold_9141_17
unknown
|
Not on your lists |
comp(22613..24199)
|
This feature has no annotations |
|
berkeley_reactor_200306_biofilm_scaffold_9141_18
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(24326..25813)
|
Amino acid permease-associated region n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y2M9_9SPHI
Amino acid permease-associated region {ECO:0000313|EMBL:EHQ28208.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
amino acid permease-associated protein
|
|
berkeley_reactor_200306_biofilm_scaffold_9141_19
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(25999..28296)
|
Alpha-1,2-mannosidase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PM40_CHIPD
Alpha-1,2-mannosidase {ECO:0000313|EMBL:ACU62254.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
alpha-1,2-mannosidase
|
|
berkeley_reactor_200306_biofilm_scaffold_9141_20
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
28389..29864
|
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EAW8_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EDM37509.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_9141_21
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
29890..30585
|
ABC transporter related protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YGY3_9SPHI
ABC transporter related protein {ECO:0000313|EMBL:EHQ27392.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
ABC transporter
|
|
berkeley_reactor_200306_biofilm_scaffold_9141_22
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
30590..31678
|
Signal transduction histidine kinase, LytS n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PT72_CHIPD
Signal transduction histidine kinase LytS {ECO:0000313|EMBL:AHM60716.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
signal transduction histidine kinase LytS
|
|
berkeley_reactor_200306_biofilm_scaffold_9141_23
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
31681..32394
|
Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PT73_CHIPD
LytTR family two component transcriptional regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ACU60863.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_9141_24
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(32400..33377)
|
Cytochrome c-related protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NM46_9SPHI
cytochrome C
Cytochrome C {ECO:0000313|EMBL:AHF14740.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
|
|
berkeley_reactor_200306_biofilm_scaffold_9141_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(33506..34654)
|
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000360AFCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99186.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_9141_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(34859..36040)
|
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000360AFCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99186.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_9141_27
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(36171..37289)
|
glucose-fructose oxidoreductase n=1 Tax=Segetibacter koreensis RepID=UPI00037AC224
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ACU63490.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_9141_28
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(37437..38159)
|
glutamyl-Q tRNA(Asp) synthetase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B3972F
Uncharacterized protein {ECO:0000313|EMBL:KIC96221.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
glutamyl-or glutaminyl-tRNA synthetase
|
|
berkeley_reactor_200306_biofilm_scaffold_9141_29
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(38284..39591)
|
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PH19_CHIPD
type I phosphodiesterase/nucleotide pyrophosphatase
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:ACU63570.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_9141_30
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(39607..40479)
|
Endonuclease/exonuclease/phosphatase family protein n=2 Tax=Parabacteroides RepID=E1YN83_9PORP
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:EFK64993.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
|