name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
berkeley_reactor_200306_biofilm_scaffold_2368_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(3..842)
|
Integral membrane sensor hybrid histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TEH6_NIAKG
integral membrane sensor hybrid histidine kinase
Integral membrane sensor hybrid histidine kinase {ECO:0000313|EMBL:AEV99398.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
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berkeley_reactor_200306_biofilm_scaffold_2368_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
977..3700
|
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBL7_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97127.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
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berkeley_reactor_200306_biofilm_scaffold_2368_3
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
3825..7091
|
Glycoside hydrolase family 2 sugar binding n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XYM6_PEDHD
Uncharacterized protein {ECO:0000313|EMBL:ETZ23905.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
family 2 glycoside hydrolase
|
|
berkeley_reactor_200306_biofilm_scaffold_2368_4
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(7081..8040)
|
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y1S5_9SPHI
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:EHQ24734.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
alcohol dehydrogenase zinc-binding domain-containing protein
|
|
berkeley_reactor_200306_biofilm_scaffold_2368_5
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(8105..8689)
|
Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PNL3_CHIPD
Crp/Fnr family transcriptional regulator
Putative transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ACU64113.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
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berkeley_reactor_200306_biofilm_scaffold_2368_6
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(8699..9865)
|
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000368BF76
FAD-binding monooxygenase
Monooxygenase, FAD-binding {ECO:0000313|EMBL:ABQ05848.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
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berkeley_reactor_200306_biofilm_scaffold_2368_7
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(9890..10639)
|
Helix-turn-helix, AraC domain protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IK55_FLUTR
AraC family transcriptional regulator
Helix-turn-helix, AraC domain protein {ECO:0000313|EMBL:AEA42954.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
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berkeley_reactor_200306_biofilm_scaffold_2368_8
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(10767..11159)
|
Putative endoribonuclease n=1 Tax=Pedobacter sp. BAL39 RepID=A6E6U2_9SPHI
hypothetical protein
Endoribonuclease L-PSP {ECO:0000313|EMBL:AKD54058.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
|
|
berkeley_reactor_200306_biofilm_scaffold_2368_9
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
11434..12726
|
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIL46559.1}; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis NUHP1.;"
|
|
berkeley_reactor_200306_biofilm_scaffold_2368_10
unknown
|
Not on your lists |
12846..13208
|
This feature has no annotations |
|
berkeley_reactor_200306_biofilm_scaffold_2368_11
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(13265..13834)
|
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003818EA4
Crp/Fnr family transcriptional regulator
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:AIZ63951.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
|
|
berkeley_reactor_200306_biofilm_scaffold_2368_12
unknown
|
Not on your lists |
14152..14658
|
This feature has no annotations |
|
berkeley_reactor_200306_biofilm_scaffold_2368_13
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
15190..16254
|
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VZ39_DYAFD
Replication factor C large subunit {ECO:0000313|EMBL:KHJ38323.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_2368_trna_3
unknown
|
Not on your lists |
comp(16770..16853)
|
transferRNA Leu
|
|
berkeley_reactor_200306_biofilm_scaffold_2368_14
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(17008..18156)
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7W9_NIAKG
integral membrane sensor signal transduction histidine kinase
|
|
berkeley_reactor_200306_biofilm_scaffold_2368_15
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
18186..19256
|
Glycosyl transferase family 2 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7X0_NIAKG
Glycosyl transferase family 2 {ECO:0000313|EMBL:KIC93119.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
family 2 glycosyl transferase
|
|
berkeley_reactor_200306_biofilm_scaffold_2368_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
19310..19516
|
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7X1_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV96909.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_2368_trna_1
unknown
|
Not on your lists |
19659..19731
|
transferRNA Gly
|
|
berkeley_reactor_200306_biofilm_scaffold_2368_trna_2
unknown
|
Not on your lists |
19802..19887
|
transferRNA Leu
|
|
berkeley_reactor_200306_biofilm_scaffold_2368_17
unknown
|
Not on your lists |
comp(19925..20524)
|
This feature has no annotations |
|
berkeley_reactor_200306_biofilm_scaffold_2368_18
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
20541..21509
|
Terpene synthase metal-binding domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PCR2_CHIPD
terpene synthase metal-binding domain-containing protein
Terpene synthase metal-binding domain protein {ECO:0000313|EMBL:ACU61411.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_2368_19
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
21723..22754
|
Transcriptional regulator, LacI family n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QIK8_SPILD
LacI family transcription regulator
LacI family transcription regulator {ECO:0000313|EMBL:AHF14086.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
|
|
berkeley_reactor_200306_biofilm_scaffold_2368_20
RBG_13_Bacteroidetes_43_22_curated, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
22741..25275
|
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000370CDDA
hypothetical protein
Tax=RBG_13_Bacteroidetes_43_22_curated
|
|
berkeley_reactor_200306_biofilm_scaffold_2368_21
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
25297..26460
|
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B64275
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE48513.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_2368_22
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
26526..27770
|
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036B5A66
Uncharacterized protein {ECO:0000313|EMBL:KIC95251.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_2368_23
unknown
|
Not on your lists |
27843..28625
|
This feature has no annotations |
|
berkeley_reactor_200306_biofilm_scaffold_2368_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(28632..29282)
|
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035F526B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03509.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_2368_25
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(29286..30128)
|
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T824_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC93112.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_2368_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
30210..31430
|
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T910_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV96963.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_2368_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
31446..32222
|
MazG family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T911_NIAKG
MazG family protein
MazG family protein {ECO:0000313|EMBL:AEV96964.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|