name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
berkeley_reactor_200306_biofilm_scaffold_113606_1
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(378..824)
|
50S ribosomal protein L9 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRF7_CHIPD
50S ribosomal protein L9
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_113606_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(925..1191)
|
30S ribosomal protein S18 n=1 Tax=Segetibacter koreensis RepID=UPI00036C0A3F
30S ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_113606_3
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(1195..1548)
|
30S ribosomal protein S6 n=1 Tax=Niabella soli DSM 19437 RepID=H1NSD9_9SPHI
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
30S ribosomal protein S6
|
|
berkeley_reactor_200306_biofilm_scaffold_113606_4
unknown
|
Not on your lists |
1588..1740
|
This feature has no annotations |
|
berkeley_reactor_200306_biofilm_scaffold_113606_5
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
1784..3097
|
Heat shock protein Hsp90 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB12_NIAKG
Chaperone protein HtpG {ECO:0000313|EMBL:GAO45687.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
Heat shock protein Hsp90
|
|
berkeley_reactor_200306_biofilm_scaffold_113606_6
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
3128..3634
|
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000376A1F2
Molecular chaperone Hsp90 {ECO:0000313|EMBL:KIC89397.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
Heat shock protein Hsp90
|
|
berkeley_reactor_200306_biofilm_scaffold_113606_7
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(3631..5346)
|
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037EE6FC
Single-stranded DNA-specific exonuclease RecJ {ECO:0000313|EMBL:GAO45688.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
exonuclease RecJ
|
|
berkeley_reactor_200306_biofilm_scaffold_113606_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(5362..6324)
|
Trans-hexaprenyltranstransferase {ECO:0000313|EMBL:AEW01353.1}; EC=2.5.1.30 {ECO:0000313|EMBL:AEW01353.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Trans-hexaprenyltranstransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB06_NIAKG
Trans-hexaprenyltranstransferase
|
|
berkeley_reactor_200306_biofilm_scaffold_113606_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
6534..8201
|
OmpA/MotB domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB05_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC91975.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
OmpA/MotB domain-containing protein
|
|
berkeley_reactor_200306_biofilm_scaffold_113606_10
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
8284..9099
|
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035E7F35
Membrane protein {ECO:0000313|EMBL:KIC89393.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
outer membrane assembly lipoprotein YfiO
|
|
berkeley_reactor_200306_biofilm_scaffold_113606_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
9074..9415
|
DNA-directed RNA polymerase, omega subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB03_NIAKG
DNA-directed RNA polymerase subunit omega
DNA-directed RNA polymerase, omega subunit {ECO:0000313|EMBL:AEW01350.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_113606_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
9467..10708
|
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase {ECO:0000313|EMBL:AEW01349.1}; EC=6.3.2.5 {ECO:0000313|EMBL:AEW01349.1};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB02_NIAKG
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase
|
|
berkeley_reactor_200306_biofilm_scaffold_113606_13
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
10701..11624
|
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB01_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC89390.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_113606_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
11621..12316
|
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB00_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01347.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_113606_15
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
12358..13056
|
3-oxoacid CoA-transferase, A subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRC5_CHIPD
Succinyl-CoA:3-ketoacid-CoA transferase {ECO:0000313|EMBL:KIC89388.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
3-oxoacid CoA-transferase subunit A
|
|
berkeley_reactor_200306_biofilm_scaffold_113606_16
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
13069..13725
|
3-oxoacid CoA-transferase, B subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRC4_CHIPD
Succinyl-CoA:3-ketoacid-CoA transferase {ECO:0000313|EMBL:KIC89386.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
3-oxoacid CoA-transferase subunit B
|
|
berkeley_reactor_200306_biofilm_scaffold_113606_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(13720..14376)
|
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAZ7_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01344.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_113606_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(14468..15118)
|
Two component transcriptional regulator, LuxR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAZ6_NIAKG
two component transcriptional regulator, LuxR family
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEW01343.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_113606_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(15174..16019)
|
Putative signal transduction histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAZ5_NIAKG
putative signal transduction histidine kinase
Putative signal transduction histidine kinase {ECO:0000313|EMBL:AEW01342.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_113606_20
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(16091..16753)
|
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAZ4_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC89383.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_113606_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(16813..17199)
|
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAZ3_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01340.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_113606_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
17981..18640
|
Two component transcriptional regulator, LuxR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAZ2_NIAKG
two component transcriptional regulator, LuxR family
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEW01339.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_113606_23
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(18650..19321)
|
Two component transcriptional regulator, LuxR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIP8_NIAKG
Putative two-component response regulator {ECO:0000313|EMBL:GAO45286.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
two component transcriptional regulator, LuxR family
|
|
berkeley_reactor_200306_biofilm_scaffold_113606_24
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(19347..20129)
|
Histidine kinase n=1 Tax=Joostella marina DSM 19592 RepID=I3CA06_9FLAO
Histidine kinase {ECO:0000313|EMBL:EIJ40449.1}; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
histidine kinase
|
|
berkeley_reactor_200306_biofilm_scaffold_113606_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(20108..20797)
|
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAZ4_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01341.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_113606_26
unknown
|
Not on your lists |
20945..21277
|
This feature has no annotations |
|
berkeley_reactor_200306_biofilm_scaffold_113606_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
21905..22576
|
Two component transcriptional regulator, LuxR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9W7_NIAKG
two component transcriptional regulator, LuxR family
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEW01311.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_113606_28
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
22577..23401
|
Aminotransferase class IV n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRC3_CHIPD
class IV aminotransferase
Aminotransferase class IV {ECO:0000313|EMBL:ACU64362.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_113606_29
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
23385..24698
|
Deoxyribodipyrimidine photo-lyase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9W9_NIAKG
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:KIC89303.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
deoxyribodipyrimidine photo-lyase
|
|
berkeley_reactor_200306_biofilm_scaffold_113606_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(24711..25511)
|
1,4-dihydroxy-6-naphtoate synthase {ECO:0000256|HAMAP-Rule:MF_00996}; EC=4.1.-.- {ECO:0000256|HAMAP-Rule:MF_00996};; Menaquinone biosynthetic enzyme MqnD {ECO:0000256|HAMAP-Rule:MF_00996}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9X2_NIAKG
hypothetical protein
|