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berkeley_reactor_200306_biofilm_scaffold_34479_71

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 84209..85540

Top 3 Functional Annotations

Value Algorithm Source
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component n=1 Tax=Rhizobium sp. AP16 RepID=J2WBF9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.4
  • Coverage: 443.0
  • Bit_score: 741
  • Evalue 3.40e-211
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component {ECO:0000313|EMBL:EJK79960.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 443.0
  • Bit_score: 741
  • Evalue 4.80e-211
aliphatic sulfonates ABC transporter similarity KEGG
DB: KEGG
  • Identity: 84.2
  • Coverage: 443.0
  • Bit_score: 739
  • Evalue 4.80e-211

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Taxonomy

Rhizobium sp. AP16 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1332
ATGGATGCCACCGTCACCCCGAGGAAGCCCGAGGCCCTCGACGGCACGCCGCTGGTCACGGCCGAGAAGGTCGGCCAGACCTACGACAAGGGCGCGTCCGGTTCGCTGGTCGTGCTGGAGAGCGTCGACCTCACGCTGAGGCCGGCCGAGATCGTCGGCCTGCTCGGCCGCTCCGGCTCGGGCAAGTCCACGCTGCTGCGCGCCATTGCCGGCCTGATCACGCCGAGCAGCGGCACCATCACCTTCCAGGGCCGGCGCCTGACCGGACCGTCCTCGGGCATCGCCGTCGTGTTCCAGAGCTTCGCTCTGTTCCCCTGGCTCACCGTGCTGCAGAACGTCGAGGTCGGCCTGGAGGCGCAGGGCGTCGTGCCAGCCGAGCGGCGCAAGCGCGCCCTCGCCGCCATCGATCTCATCGGCCTCGACGGCTTCGAGAACGCCTATCCCAAGGAGCTGTCGGGCGGCATGCGCCAGCGCGTCGGCCTCGCCCGAGCCCTGGTGGTGCACCCCAAGGTGCTCCTGATGGACGAGCCGTTCTCCGCTCTCGACGTGCTCACCGCCGAGACGCTGCGCACCGACCTCCTCGATCTATGGTGCGAGGGACGGATGCCGATCGAGGCGATCCTGATGGTGACGCACAATATCGAGGAGGCGGTGCTGATGTGCGACCGCATCCTGATCTTCGGATCGAATCCCGGCCGGGTCATCGCCGAGATCCGGGTCGACATGCCGCAGCCGCGCAACCGGCTCGACCCGGCCTTCCGGGCGCTGGTCGAGGACATCTACGCCCGGATGACGGCGAGGACCGGCGCGCCGACCCGCGACGGGCTCTTCCCCGGCACCGGCATCGCCATGGCGCTGCCACCGGTCTCCACCAACCTGATGGCCGGCCTGATCGAGACCGTGGCGGCCGCGCCCTATCGCGGCCGCGCCGACCTGCCGCCGCTGGCGCAGGAGCTGCACCTGGACATCGACGAGCTCTTCCCCGTGGCCGAGACGCTGCAGCTCCTGCGCTTCGCGGATCTCGAAGGCGGCGACATCACCCTGACGGCGCCGGCCCTGCGCTTCGCCGACAGCGACGTCGACGAGCGCAAGCGCCTCTTCGCCCAGCACCTGGCGACCTATGTGCCGCTCGCGGCCCATATCCGGCGGGTTCTCGATGAGCGGCCGACCCACCAGGCGCCGGCGCGCCGCTTCCGCGACGAGCTCGAGGACCACATGTCGGAGACCTACGCCGAGAGGACGCTGCAGGCGGTGACGAGCTGGGCCCGCTATGCGGAGTCCTTCGCCTATGACGAGCAGGCGGACCTGTTCACGCTCGAGGATCCGAACTGA
PROTEIN sequence
Length: 444
MDATVTPRKPEALDGTPLVTAEKVGQTYDKGASGSLVVLESVDLTLRPAEIVGLLGRSGSGKSTLLRAIAGLITPSSGTITFQGRRLTGPSSGIAVVFQSFALFPWLTVLQNVEVGLEAQGVVPAERRKRALAAIDLIGLDGFENAYPKELSGGMRQRVGLARALVVHPKVLLMDEPFSALDVLTAETLRTDLLDLWCEGRMPIEAILMVTHNIEEAVLMCDRILIFGSNPGRVIAEIRVDMPQPRNRLDPAFRALVEDIYARMTARTGAPTRDGLFPGTGIAMALPPVSTNLMAGLIETVAAAPYRGRADLPPLAQELHLDIDELFPVAETLQLLRFADLEGGDITLTAPALRFADSDVDERKRLFAQHLATYVPLAAHIRRVLDERPTHQAPARRFRDELEDHMSETYAERTLQAVTSWARYAESFAYDEQADLFTLEDPN*