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berkeley_reactor_200306_biofilm_scaffold_59887_3

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(1648..2343)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Xanthobacteraceae RepID=UPI00035D92AA similarity UNIREF
DB: UNIREF100
  • Identity: 80.3
  • Coverage: 228.0
  • Bit_score: 383
  • Evalue 9.40e-104
50S ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 228.0
  • Bit_score: 381
  • Evalue 1.30e-103
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 228.0
  • Bit_score: 381
  • Evalue 6.60e-103

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Taxonomy

Starkeya novella → Starkeya → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGTCTGACGGAAAGCGTATTCGCGCGGCGAAGGACGGCATCGACCGCATCAAGCTCTACGGCCTCGACGAAGCGGTGAAGCTCGTCAAGGACCGCGCCAAGGCCAAGTTCGACGAGACCGTCGAGATCGCCATGAACCTCGGCGTCGACCCGCGCCATGCCGACCAGATGGTCCGCGGCGTCTGCAACCTGCCGAACGGCTCCGGCCGGACCCTGCGGGTCGCCGTGTTCGCGCGCGGCGCCAAGGCCGACGAGGCCAGGGCGGCCGGCGCCGACGTGGTCGGCGCGGAGGACCAGGTCCACACCGGGACCGCAGGCACGATCGAGTTCGATCGCTGCATCGCCACGCCCGACATGATGCCGCTGGTCGGCCGCCTCGGCAAGGTGCTCGGCCCGCGCGGCCTGATGCCGAACCCCAAGGTCGGCACCGTGACCATGGACATCACCAATGCGGTCAAGGCCTCCAAGGGCGGCTCGGTCGAGTTCCGCGTCGAGAAGGCTGGCATCGTCCACGGCGCCGTCGGCAAGGCCTCGTTCCCGGCCGAGAAGCTGGCCGAGAACATCAAGGCCTTCGCCGACGCTGTGATCAAGGCCAAGCCCACGGGCGCCAAGGGCACCTATGTCCAGCGCGTCGCCATCTCCTCGACCATGGGCCCGGGCGTCAAGATCGAGCCGTCGGCGGTGCTCGGGGCCTGA
PROTEIN sequence
Length: 232
MSDGKRIRAAKDGIDRIKLYGLDEAVKLVKDRAKAKFDETVEIAMNLGVDPRHADQMVRGVCNLPNGSGRTLRVAVFARGAKADEARAAGADVVGAEDQVHTGTAGTIEFDRCIATPDMMPLVGRLGKVLGPRGLMPNPKVGTVTMDITNAVKASKGGSVEFRVEKAGIVHGAVGKASFPAEKLAENIKAFADAVIKAKPTGAKGTYVQRVAISSTMGPGVKIEPSAVLGA*