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berkeley_reactor_200306_biofilm_scaffold_95231_127

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(135312..136721)

Top 3 Functional Annotations

Value Algorithm Source
Glu-tRNA amidotransferase, subunit A n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ENI5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 460.0
  • Bit_score: 387
  • Evalue 1.70e-104
Uncharacterized protein {ECO:0000313|EMBL:KGM34502.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.9
  • Coverage: 468.0
  • Bit_score: 411
  • Evalue 1.60e-111
amidase protein similarity KEGG
DB: KEGG
  • Identity: 44.5
  • Coverage: 456.0
  • Bit_score: 365
  • Evalue 2.00e-98

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Taxonomy

Inquilinus limosus → Inquilinus → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1410
ATGACCCATCCCCTGACCGCGACCGCCATCGCCGCCGCCGTGCGCTCGGGCGGGCTGAGCGCGCGGCTCGCCGTGGAGGTGGCTCTGGCACGCATCGGCACGGTGCAGCCGGCGCTCAACTGCTTCACCGAGGTCTACGGCGAGGAGGCGCTGGTCCAGGCCGCGACCATCGACGCCCTGCCGCTCGATCGGCGCGCCGGCCTGGCCCTGTGCGGCGTGCCCATCGCCATCAAGGACTTCACGCCGATCGCCGGCAAGCGCACCACCTTCGGCTCGAAGGTCTTCCGTGACCATGTCGCCGATGCCGATCCGGTGATCGTCCGGCGGCTGAAGGCGGCGGGCGCCATCGTCGTCGGCCACACCACCACGCCGGAATTCGCCTATTCCGGCTACACCCACAGCCCGCTCTGGGGCATCACGCGCAATCCCTGGAATATGGGGCGCACCCCCGGCGGATCCTCCGGCGGTTCCGGCGCCGCCGTGGCGGCGGGATGCGTGCCGCTGGCCGAGGGCACGGACATGGGCGGCTCGGTGCGCATCCCCGGCTCGCTCTGCGGCATCGTCGGCATGAAGCCGAGCTTCGGCCGCATCCCCCTCGACATCTCGCGCACGCAATATGATTCCCTCGCCCATTTCGGGCCGCTGGCCCGCACGGTGGACGATGCGGCGCTGTTCCTGTCCGTCACCGCGGGGCCCGACGACGCCGACGTCTTCTCCCTGCCGTCGGCGCCCTCGGTGCTGCCGCTGCCGAGCCTGGAGGCGCCGCGCCTGGCGGTCTCGCCCGATCTCGATGTCTATGCGACGAGCCCTGCCGTGGCCGCCCTGTTCGAGGCGACGGTGGAGGCCCTGGCAGCCGCCGGCGCCCGGATCGAACGGGTGCGCACGCCCTTCACCCGCGGCCATATCGAGGACCAGGACGCGCTCTGGGCCTATTGCTTCGCCGGCGATTTCGGCCACCTCCTCGAGGAGCACGAGGCCGAGCTCGATCCCGGCGTGGTGCGGTTGATCCGGGCCGGACGCCGCCTCGACGCGGTGGCGCTCCGGGCGATCGAGCATCGCCGCACCGCGCTCTGGCGCGCCTTCGCGCCGCTGGTGGCCGGATATGATGCGCTGCTCTGCCCGACCACCTGCGACACGGCGCGGCCGGTCGAGGCCTTCGACGACCCTTCCGTGACCATGCCGGACGGGCGGCTCTACACCCAGTCCATGACCGAGCCCTTCAACCTGGTCAGCGCCTGCCCGGTGGTGTCGGTGCCGATGGGCCTTGCCGCGGACGGCCTGCCCGCCGGCATGCAGGTGGTCGCCCGGCGCCATGACGATGCCCGCGCCCTGGCCGTGGCGAAATGGATCGAGGGCGTGCGGCCCTGGAGCTTCCCCACCGGGCTTGGCGAGGCGGCGCCGGTGTCGTAA
PROTEIN sequence
Length: 470
MTHPLTATAIAAAVRSGGLSARLAVEVALARIGTVQPALNCFTEVYGEEALVQAATIDALPLDRRAGLALCGVPIAIKDFTPIAGKRTTFGSKVFRDHVADADPVIVRRLKAAGAIVVGHTTTPEFAYSGYTHSPLWGITRNPWNMGRTPGGSSGGSGAAVAAGCVPLAEGTDMGGSVRIPGSLCGIVGMKPSFGRIPLDISRTQYDSLAHFGPLARTVDDAALFLSVTAGPDDADVFSLPSAPSVLPLPSLEAPRLAVSPDLDVYATSPAVAALFEATVEALAAAGARIERVRTPFTRGHIEDQDALWAYCFAGDFGHLLEEHEAELDPGVVRLIRAGRRLDAVALRAIEHRRTALWRAFAPLVAGYDALLCPTTCDTARPVEAFDDPSVTMPDGRLYTQSMTEPFNLVSACPVVSVPMGLAADGLPAGMQVVARRHDDARALAVAKWIEGVRPWSFPTGLGEAAPVS*