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berkeley_reactor_200306_biofilm_scaffold_95231_188

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(194351..194812)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L13 n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F6D2BE similarity UNIREF
DB: UNIREF100
  • Identity: 80.9
  • Coverage: 152.0
  • Bit_score: 263
  • Evalue 7.20e-68
50S ribosomal protein L13 similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 152.0
  • Bit_score: 257
  • Evalue 1.90e-66
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 152.0
  • Bit_score: 257
  • Evalue 9.50e-66

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Taxonomy

Beijerinckia indica → Beijerinckia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 462
ATGTCCACCTTCACGCTCAAGACCGCCGACATCGAGAAGAAATGGTATCTGATCGACGCGAAAGGCCTCGTTGTGGGCCGCCTCGCGACGATCATCGCCATGCGTCTGCGCGGCAAGCACAAGCCGACCTACACGCCCCATCTCGACTGCGGCGACAACGTCATCGTCATCAACGCCGACAAGGTGGTGTTCACCGGCCGCAAGCGCGACCAGAAGGTGTACCACTATCACACCGGGCATCCCGGCGGCATCAAGGAGCGCAGCGCCAAGTTCATCCTCGAAGGGCGCTTCCCCGAGCGCATCGTGGAGAAGGCGGTGGAGCGCATGATCCCGCGTGGCCCGCTCGGCCGCAAGCAGCTCCTGAACCTGCGCGTCTACAAGGGCACCGAGCATCCGCACGAGGCGCAGCAGCCCGTGGCGCTCGACGTCGGCGCGATGAACGCCAAGAACCTGAAGGTCTGA
PROTEIN sequence
Length: 154
MSTFTLKTADIEKKWYLIDAKGLVVGRLATIIAMRLRGKHKPTYTPHLDCGDNVIVINADKVVFTGRKRDQKVYHYHTGHPGGIKERSAKFILEGRFPERIVEKAVERMIPRGPLGRKQLLNLRVYKGTEHPHEAQQPVALDVGAMNAKNLKV*