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berkeley_reactor_200306_biofilm_scaffold_95231_237

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(242806..243933)

Top 3 Functional Annotations

Value Algorithm Source
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=882800 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens DSM 13060.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.9
  • Coverage: 373.0
  • Bit_score: 582
  • Evalue 3.10e-163
tgt; Queuine tRNA-ribosyltransferase (tRNA-guanine transglycosylase) (guanine insertion enzyme) (EC:2.4.2.29) similarity KEGG
DB: KEGG
  • Identity: 75.6
  • Coverage: 373.0
  • Bit_score: 581
  • Evalue 1.40e-163
Queuine tRNA-ribosyltransferase n=1 Tax=Methylobacterium extorquens DSM 13060 RepID=H1KMJ2_METEX similarity UNIREF
DB: UNIREF100
  • Identity: 75.9
  • Coverage: 373.0
  • Bit_score: 582
  • Evalue 2.20e-163

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Taxonomy

Methylobacterium extorquens → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1128
ATGACGGGCGTTTCCTTCACCGTTCATGCCGCCGAGGGTGCGGCGCGCACCGGCGTGCTCACGCTCGGCCGCGGCGCTGTGCGGACCCCTGCCTTCATGCCGGTCGGCACCGCCGGCACGGTCAAGGCGATGTATGTCGACCAGGTGCGTGACCTCGGCGCCGACATCATCCTCGGCAACACCTACCACCTGATGCTGCGCCCCGGGGCCGAGCGGGTCGCCGCGCTCGGCGGCCTGCACGCCTTCTCGCGCTGGCAGGGGCCGATCCTCACCGATTCCGGCGGCTTCCAGGTGATGTCCCTCGCCGGCCTGCGCAAGCTCGACAAGGACGGCGTCACCTTCAAGAGCCATGTCGACGGCTCGATGCATCGCCTCACGCCGGCCCGCTCGGTGGAGATCCAGACGCTGCTCGACAGCGACATCGTCATGCAGCTCGACGAATGCGTGCGCCTGCCCACCGACCGCGCCAATATCGAGCGGGCCATGCGCCTGTCGCTGGACTGGGCCGAGCGCTCCAAGGCGGCCTTCGGGACCCAGCCGGGCAAGGCGATCTTCGGCATCGTCCAGGGCGGCGACGACAAGGCGCTGCGCATCGAGTCCGCGGAGGCGCTGGCCGCCATGGACTTCCCCGGCCTCGCCGTCGGCGGCCTCGCCGTGGGCGAGCCGCAGGCCGTCATGCTCGACATGATCGAGACCGTGGTGCCGCATCTGCCGGCGGGCAAGCCGCGCTACCTCATGGGCGTCGGCACGCCGGACGATCTCGTCGAGAGCGTGGCGCGCGGCATCGACATGTTCGACTGCGTCATGCCGACCCGCGCCGGCCGGCACGGCCTGGCCTATTCCCGCTTCGGCAAGATCAACCTGAAGAACGCCCGCCATGCTGAGGACCCTCGGCCGCTGGACGAGGCCTCCGCCTGCCCGGCGGCGCGCGACTACAGCCGCGCCTATCTGCACCATCTCACCCGGGCCAACGAGATCCTCGGCATGATGCTGCTGAGCTGGGTGAACCTCGCCTACTACCAGGAGCTGATGGCCGGCATGCGCGCGGCGATCGCCGCCGGGCGCTTCGCCGATTTCCGGGCCGAAGTGCGGGAAGGCTGGGCACGGGGCGACCTGCCGGCGCTCTGA
PROTEIN sequence
Length: 376
MTGVSFTVHAAEGAARTGVLTLGRGAVRTPAFMPVGTAGTVKAMYVDQVRDLGADIILGNTYHLMLRPGAERVAALGGLHAFSRWQGPILTDSGGFQVMSLAGLRKLDKDGVTFKSHVDGSMHRLTPARSVEIQTLLDSDIVMQLDECVRLPTDRANIERAMRLSLDWAERSKAAFGTQPGKAIFGIVQGGDDKALRIESAEALAAMDFPGLAVGGLAVGEPQAVMLDMIETVVPHLPAGKPRYLMGVGTPDDLVESVARGIDMFDCVMPTRAGRHGLAYSRFGKINLKNARHAEDPRPLDEASACPAARDYSRAYLHHLTRANEILGMMLLSWVNLAYYQELMAGMRAAIAAGRFADFRAEVREGWARGDLPAL*