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berkeley_reactor_200306_biofilm_scaffold_95231_240

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(245678..247384)

Top 3 Functional Annotations

Value Algorithm Source
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.5
  • Coverage: 543.0
  • Bit_score: 818
  • Evalue 3.00e-234
lysK; lysyl-tRNA synthetase (EC:6.1.1.6) similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 558.0
  • Bit_score: 801
  • Evalue 1.00e-229
Lysine--tRNA ligase n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4R2G1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 73.5
  • Coverage: 543.0
  • Bit_score: 818
  • Evalue 2.20e-234

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Taxonomy

Lutibaculum baratangense → Lutibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1707
ATGCCAGACCTCTTTCCGGCCGAGCTCGTCGCGGCCGCCAACGCCTCCGCCGCCTGGCCTTTCGAGGAGGCGAGAAAGCTCGTCGCCCGCCTCGAGAAGCAGGGCAGGCCGGAGAAGGAGGTGCTGTTCGAGACCGGCTACGGTCCCTCCGGCCTGCCGCATATCGGCACGTTCGGCGAGGTGGCGCGCACCACCATGGTGCGCCACGCCTTCGACGTGCTGACCGAGGGACGCCACGTCACGCGGCTCCTGTGCTTTTCCGACGACATGGACGGCATGCGCAAGGTGCCCGAGAACGTGCCGGCGCCGGACATGCTGCGCCGGCATCTCGGCAAGCCCCTGACCAGGGTGCCCGACCCCTTCGGCAAGTTCGAGAGCTTCGGCCACCACAACAACGCCATGCTGCGGCGCTTCCTCGATTCCTTCGGCTTCGACTACGAGTTCGCCAGCGCCACCGACTACTATGCCGCCGGACGGCTCGACGAGAAGCTTCTGGTGATGCTCGAGCGCTATGACGACGTCATGGCGATCATGCTGCCGACGCTCCGGGAGGAGCGGCGCAAGACCTATGCGCCGTTCCTGCCCGTGCATCCGGAGACCGGCATCGTCATGCAGGTGCCGATCGAGGAGCGCCATCCCGGCCGCGGCACCATCGTGTGGACCGACCCCGACACCGGCAAGCGCTTCGAGACCCCGGTGACCGGCGGCCATGCCAAGGCGCAGTGGAAGCCGGACTGGGCGCTGCGCTGGGCGGCGCTCGGCGTCGACTACGAGATGTCCGGCAAGGACCATATCGACAATGTCCGGATCTCCAGCCAGATCTGCAAGGTGCTCGGCGGCACCCCGCCCGACGGCTTCAACTACGAGCTGTTCCTCGACGATCTCGGCCAGAAGATCTCCAAGTCGAAGGGCAACGGCCTGACCATCGACGAGTGGCTGACCTATGCCAGCCCCGAAAGCCTGTCGCTGTTCATGTTCCAGAAGCCGCGCGAGGCCAAGAAGCTCTATTTCGACGTCATCCCGCGCACCGCCGACGAATATCTGCAGTTCCTCGCCGGCTATGAACGCCAGGACTGGAAGAACCGCCTCGGCAATCCGGCTTGGCACATCCATGGCGGCAATCCGCCGGCGCCCGAGACCATCGGCGGGGAGGGGGAGCGCACCAGCGTCTCCTTCGGCCTGCTGCTCAACCTCGTCGCCGTGGCCAATGCCGAGAGCAAGGACGTGCTGTGGGCCTTCCTCCGGCGCTATGCGCCGGGCGCCTCGGCCGAGACCCACCCGCGCCTCGACGCCCTGGTCGGCTACGCCATCCGCTATTTCCGCGACTTCGTGAAGCCGGCCAAGGCGTACCATGTGCCGACCGAGGCGGAGCGGCAGGCCCTGCAGGCCCTGTCCGACGCGCTCGGCCGCCTGCCGGCGGACGCTTCGGCGACGACGATCCAGGAAGCGGTCTACGATGTCGGCCGCGCCCAGCCGGCCTACCAGGACTTCAAGGCCAAGGGTGCCACACCGGAGCGGCCGGGCGTGTCGCTCGAATGGTTCAACACGCTCTACCGCATCCTGCTCGGCGAGCAGCGCGGGCCGCGCTTCGGCTCCTTCGCGGCCATCTACGGCATTGCCGAGACCCGCGACCTGATCGCCAAGGCGCTGTCGGGCGAGCTGATCCGCGAGCACGAGGCCTTCGTCGCGGGGCTGAAGAAGGCCTGA
PROTEIN sequence
Length: 569
MPDLFPAELVAAANASAAWPFEEARKLVARLEKQGRPEKEVLFETGYGPSGLPHIGTFGEVARTTMVRHAFDVLTEGRHVTRLLCFSDDMDGMRKVPENVPAPDMLRRHLGKPLTRVPDPFGKFESFGHHNNAMLRRFLDSFGFDYEFASATDYYAAGRLDEKLLVMLERYDDVMAIMLPTLREERRKTYAPFLPVHPETGIVMQVPIEERHPGRGTIVWTDPDTGKRFETPVTGGHAKAQWKPDWALRWAALGVDYEMSGKDHIDNVRISSQICKVLGGTPPDGFNYELFLDDLGQKISKSKGNGLTIDEWLTYASPESLSLFMFQKPREAKKLYFDVIPRTADEYLQFLAGYERQDWKNRLGNPAWHIHGGNPPAPETIGGEGERTSVSFGLLLNLVAVANAESKDVLWAFLRRYAPGASAETHPRLDALVGYAIRYFRDFVKPAKAYHVPTEAERQALQALSDALGRLPADASATTIQEAVYDVGRAQPAYQDFKAKGATPERPGVSLEWFNTLYRILLGEQRGPRFGSFAAIYGIAETRDLIAKALSGELIREHEAFVAGLKKA*