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berkeley_reactor_200306_biofilm_scaffold_111575_64

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 64175..64981

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, substrate binding protein (Amino acid) n=1 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=A9CL48_AGRT5 similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 269.0
  • Bit_score: 362
  • Evalue 3.40e-97
Amino acid ABC transporter {ECO:0000313|EMBL:KJC48536.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 269.0
  • Bit_score: 382
  • Evalue 2.60e-103
ABC transporter substrate binding protein (amino acid) similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 269.0
  • Bit_score: 362
  • Evalue 9.60e-98

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Taxonomy

Bradyrhizobium sp. LTSP849 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 807
ATGCTGCGTGGAATCCTTGCCGCCTTGATTGCCTTGCCGTGTGCGGGTGCCGCCATGGCTGCCGATCTCTCATCGGCGACGCTGGTCGAAAAGGGGAGCCTGACCTATGGCGTCGCGGCGAGCTTCGCGCCGTTCGAATTCCAGAAGGACGGCAAGCCGGTCGGCTTCGACATCGACATGATCGAGGCCCTGTCCAAGAAGCTCGGCGTCGAGGCCAAGCCGATGAACATGGACTTCCAGGGACTGATTCCCGCCCTGCAGGCCGCCCGCATCGACATCATCAATTCGGCCATGTACATCAACCCGAAGCGGGCGGAGCAGGTCGATTTCGTTCCCTATCTGAAGATCGGCAACCAGGTGCTCGTGCAGGCCGCGAACCCGGCCGGGATCACCGGGCGCGACGCCTCGCTGTGCGGCAAGACCGTCGCCGTCACCCTCGGCGCCATCGAGGAAATCTATGCGCGGCAGGACGACAAGCGCTGCAAGGACGCCGGCGCGGCCGGGGTCACCGTCCTGACGCTGCCGACAGGGCAGGATTCCTATCTGAGCCTGCGCCAGGGCCGGGCCGACGCGGCCTTCGACTCCACGCCCGGCGCCGTCGAGCTGCTTCAGAACAGCCCCGGCGTCTATGCGGTCGTCGGGCCGGAATTCGAGTCCAACACCCAGATCGGCATGGCGACCCGCAAGGGCGACAAGGCCATGGCGGATGCGCTGACGGCCGCGCTCAAGGAGATCGTGGCCGACGGGTCCTACAAGGCCCTGATCGCCAAGTGGAAGCTCCCGGCCTCCGTCGCCCTGTTCGACTGA
PROTEIN sequence
Length: 269
MLRGILAALIALPCAGAAMAADLSSATLVEKGSLTYGVAASFAPFEFQKDGKPVGFDIDMIEALSKKLGVEAKPMNMDFQGLIPALQAARIDIINSAMYINPKRAEQVDFVPYLKIGNQVLVQAANPAGITGRDASLCGKTVAVTLGAIEEIYARQDDKRCKDAGAAGVTVLTLPTGQDSYLSLRQGRADAAFDSTPGAVELLQNSPGVYAVVGPEFESNTQIGMATRKGDKAMADALTAALKEIVADGSYKALIAKWKLPASVALFD*